Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MRPL35P1-201ENST00000404272 572 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC069257.2-201ENST00000441819 155 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC073910.1-201ENST00000445047 438 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC009237.7-201ENST00000447357 229 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 snoU13.27-201ENST00000459278 104 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 RNU6-498P-201ENST00000459468 107 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 SRRM1P2-201ENST00000464531 1192 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.654-201ENST00000497848 106 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC005840.1-201ENST00000498412 377 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC092436.3-201ENST00000511788 257 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC104383.1-201ENST00000530297 370 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AP000907.4-201ENST00000604143 237 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC073413.2-201ENST00000604332 360 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AL078604.3-201ENST00000615580 211 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 AC090582.1-201ENST00000636321 199 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.4-201ENST00000362333 112 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.77-201ENST00000362962 107 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.164-201ENST00000363709 102 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.409-201ENST00000383990 98 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 DEFB108C-201ENST00000400154 252 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 MIR450B-201ENST00000401182 78 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 RNU6-325P-201ENST00000411132 105 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 USP9YP14-201ENST00000430663 563 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 HMGN2P34-201ENST00000437647 269 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 NFU1P2-201ENST00000448700 469 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 RNU6-948P-201ENST00000516374 107 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.26□□□□□ -2.21
RPRD1AQ96P16 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPRD1AQ96P16 FGF7P1-201ENST00000582820 288 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 OR5AK4P-201ENST00000635912 903 ntBASIC1.26□□□□□ -2.21
RPRD1AQ96P16 snoU2-30.2-201ENST00000362805 70 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 SNORA69-201ENST00000383895 132 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MRPS10P2-201ENST00000431226 381 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MTCO2P16-201ENST00000436962 677 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 RNU6-261P-201ENST00000459506 102 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 RNU6-1208P-201ENST00000459588 107 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 CPDP1-201ENST00000579660 283 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MIR3937-201ENST00000580135 106 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MIR4781-201ENST00000585250 76 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 FAM157A-202ENST00000615155 405 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 AL359697.1-201ENST00000624879 587 ntBASIC1.25□□□□□ -2.21
RPRD1AQ96P16 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPRD1AQ96P16 MTND5P35-201ENST00000557537 1720 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 MIR337-201ENST00000362281 93 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 MIR487A-201ENST00000385009 80 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AC007215.1-201ENST00000464893 276 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 RNU6-835P-201ENST00000516974 104 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AC068792.1-201ENST00000621354 417 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
RPRD1AQ96P16 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPRD1AQ96P16 RNU6-1322P-201ENST00000364309 107 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR521-1-201ENST00000384902 87 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR586-201ENST00000385035 97 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR514A2-201ENST00000385131 88 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR514A3-201ENST00000385132 88 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MTND3P16-201ENST00000452205 344 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC114982.1-201ENST00000469402 321 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC091885.1-201ENST00000506658 268 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC010486.3-201ENST00000511602 785 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR4742-201ENST00000581069 85 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 MIR8076-201ENST00000611401 83 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC006001.4-201ENST00000622243 395 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 AC091895.1-201ENST00000624494 256 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 SCARNA4-201ENST00000629045 128 ntBASIC1.23□□□□□ -2.21
RPRD1AQ96P16 RNU6-1305P-201ENST00000364353 104 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 Y_RNA.287-201ENST00000364853 94 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 RNU6-534P-201ENST00000364877 106 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 RNU6-784P-201ENST00000384330 106 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 RNU6-648P-201ENST00000410190 107 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 COX6CP10-201ENST00000416832 224 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms