Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.167-201ENST00000363735 109 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1317P-201ENST00000364582 104 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 RNU6-38P-201ENST00000384085 107 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 RNU6-331P-201ENST00000384724 107 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 MIR586-201ENST00000385035 97 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 MTND3P9-201ENST00000429526 346 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 NFU1P2-201ENST00000448700 469 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC016717.1-201ENST00000448918 286 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 COX6CP14-201ENST00000469580 174 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC091133.4-201ENST00000511142 308 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC010493.1-201ENST00000513479 292 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 CYP3A52P-201ENST00000563326 91 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 MIR5006-201ENST00000583027 110 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 MIR5692C1-201ENST00000585309 91 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC017083.3-201ENST00000609955 700 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AC073114.1-201ENST00000612027 490 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 AL158063.1-201ENST00000615349 536 ntBASIC1.07□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MIR515-2-201ENST00000384883 83 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MIR515-1-201ENST00000384884 83 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 RNA5SP494-201ENST00000410653 129 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 RNA5SP247-201ENST00000411181 105 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MTCO3P8-201ENST00000453691 755 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 U8.21-201ENST00000459536 136 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AF186996.7-201ENST00000492781 209 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.695-201ENST00000516715 107 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MRPS36P4-201ENST00000534436 298 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AC121247.2-201ENST00000604776 136 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AP001330.5-201ENST00000607176 411 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MIR8070-201ENST00000616510 88 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 AL133216.2-202ENST00000634512 349 ntBASIC1.06□□□□□ -2.24
ECHDC3Q96DC8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.1-201ENST00000352915 104 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 SNORA25.9-201ENST00000365087 128 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.381-201ENST00000365666 102 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 MIR1276-201ENST00000408707 83 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AL663109.1-201ENST00000411498 844 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 CDK8P2-201ENST00000415020 547 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AC114982.1-201ENST00000469402 321 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AC024995.1-201ENST00000523014 93 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AL157687.1-201ENST00000554853 619 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 MIR4709-201ENST00000577272 72 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AP000907.4-201ENST00000604143 237 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AL365434.2-201ENST00000607979 234 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 AC008873.1-201ENST00000625051 138 ntBASIC1.05□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.378-201ENST00000365652 113 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1080P-201ENST00000383982 107 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RNU6-784P-201ENST00000384330 106 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC016909.1-201ENST00000415916 166 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 MTCO1P20-201ENST00000425366 358 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AL359672.1-201ENST00000442302 409 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RPS27P1-201ENST00000450552 247 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC104576.1-201ENST00000524225 88 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC025423.5-201ENST00000550230 219 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC092747.3-201ENST00000603769 301 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 MZT1P2-201ENST00000604387 248 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC007684.1-201ENST00000609671 477 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RMST_3.1-201ENST00000611651 109 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 FER-210ENST00000628534 558 ntTSL 5 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 OR5AK4P-201ENST00000635912 903 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 AC099654.5-201ENST00000636479 350 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 U6.108-201ENST00000637764 58 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 MTND4P5-201ENST00000435821 1374 ntBASIC1.04□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.123-201ENST00000363338 102 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 RNU4-20P-201ENST00000365601 151 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 MIR549A-201ENST00000385268 96 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms