Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 RNU6-545P-201ENST00000362681 104 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 RNU5B-2P-201ENST00000363036 113 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 SNORD116-2-201ENST00000384274 95 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 SNORD116-6-201ENST00000384711 96 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 MIR514A2-201ENST00000385131 88 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 MIR514A3-201ENST00000385132 88 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 RNA5SP494-201ENST00000410653 129 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 EBAG9P1-201ENST00000418955 543 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 FTH1P12-201ENST00000432137 551 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AC091435.1-201ENST00000505442 584 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AL355802.3-201ENST00000607571 545 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 AL359880.1-201ENST00000621879 266 ntBASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDKL3Q8IVW4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-877P-201ENST00000383868 107 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-214P-201ENST00000384130 107 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1068P-201ENST00000410958 103 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-325P-201ENST00000411132 105 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 MTND1P29-201ENST00000448112 647 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RPS26P55-201ENST00000471178 356 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC107401.1-201ENST00000503426 685 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.693-201ENST00000516641 110 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 MRPS36P4-201ENST00000534436 298 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AL512360.1-201ENST00000555346 234 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 PIGPP4-201ENST00000584447 307 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 NBR2-204ENST00000587322 63 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC016727.2-201ENST00000603988 621 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC069114.2-201ENST00000604699 304 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 FAM157A-202ENST00000615155 405 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 AC005562.2-201ENST00000618264 111 ntBASIC1.17□□□□□ -2.22
CDKL3Q8IVW4 RNU6-862P-201ENST00000362804 105 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.231-201ENST00000364358 102 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 RNU6-522P-201ENST00000364497 107 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 RNU6-968P-201ENST00000384076 107 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 MIR521-1-201ENST00000384902 87 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 MIR549A-201ENST00000385268 96 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC004866.1-201ENST00000411748 78 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC245047.4-201ENST00000433189 144 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AL135790.2-201ENST00000437701 267 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC083904.1-201ENST00000487828 231 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 RNA5SP437-201ENST00000517249 129 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 HMGB1P33-201ENST00000563485 527 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 SNORA77B-201ENST00000578179 125 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 RMST_3.1-201ENST00000611651 109 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
CDKL3Q8IVW4 OR4G1P-203ENST00000641984 1631 ntBASIC1.15□□□□□ -2.22
CDKL3Q8IVW4 AC121333.1-201ENST00000567488 2709 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 MIR520A-201ENST00000384862 85 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 RNU6-780P-201ENST00000391030 104 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 MIR300-201ENST00000401138 83 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 MIR450B-201ENST00000401182 78 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 RPS26P42-201ENST00000413485 326 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 SEPT14P3-201ENST00000439401 183 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 AC004386.2-201ENST00000441858 148 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 AL732372.2-207ENST00000445840 183 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 SEPT14P2-201ENST00000453405 183 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 snoU13.30-201ENST00000458951 104 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
CDKL3Q8IVW4 HMGN2P9-201ENST00000476875 229 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms