Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 MIR4769-201ENST00000584126 77 ntBASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 7SK.7-201ENST00000603504 247 ntBASIC2.21□□□□□ -2.06
CCDC30Q5VVM6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 RNU6-174P-201ENST00000410406 106 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 MTND3P8-201ENST00000412909 339 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AC244636.1-201ENST00000421152 228 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AC004386.2-201ENST00000441858 148 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AL357134.1-201ENST00000445848 426 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 RN7SL274P-201ENST00000492268 272 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 MRPS17P9-201ENST00000511924 393 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 RNU2-34P-201ENST00000516534 121 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 MIR4742-201ENST00000581069 85 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AL096840.1-201ENST00000603287 93 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC30Q5VVM6 RNU1-17P-201ENST00000363022 152 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 Y_RNA.132-201ENST00000363421 102 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 RNA5SP190-201ENST00000365222 118 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 RPL30P16-201ENST00000419341 429 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 AC139712.2-201ENST00000424302 339 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MTATP6P13-201ENST00000438531 667 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 PMCHL2-203ENST00000457791 237 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 snoU13.30-201ENST00000458951 104 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MTND5P5-201ENST00000503764 376 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 AC046134.1-201ENST00000514454 666 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 RNU6-237P-201ENST00000515985 71 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MIR4790-201ENST00000577799 79 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MIR3618-201ENST00000580330 88 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 MIR5006-201ENST00000583027 110 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 AC011712.1-201ENST00000588959 234 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC30Q5VVM6 RNU6-593P-201ENST00000364716 112 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 RNU6-245P-201ENST00000384020 107 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 Y_RNA.490-201ENST00000384413 102 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 RNU6-306P-201ENST00000384617 107 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 SNORD5.1-201ENST00000458800 75 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AC018710.1-201ENST00000506509 158 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AC067942.3-201ENST00000512025 362 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AC104581.2-201ENST00000572227 430 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 MIR4273-201ENST00000582824 84 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 AC010928.2-201ENST00000588017 287 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 MIR502-201ENST00000606349 86 ntBASIC2.18□□□□□ -2.06
CCDC30Q5VVM6 RNA5SP99-201ENST00000364020 114 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AL356776.1-201ENST00000406574 447 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AC243428.1-201ENST00000421099 264 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 MTCO3P8-201ENST00000453691 755 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AC010531.2-201ENST00000465012 153 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AC114982.1-201ENST00000469402 321 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 MIR6128-201ENST00000615528 109 ntBASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC30Q5VVM6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 RNA5SP432-201ENST00000362480 116 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 RNU6-545P-201ENST00000362681 104 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 Y_RNA.248-201ENST00000364501 109 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 RNA5SP213-201ENST00000391031 106 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 MIR548K-201ENST00000408406 116 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 AC009310.1-201ENST00000414414 451 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 AC074290.1-201ENST00000448883 135 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 RN7SKP210-201ENST00000459176 261 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
CCDC30Q5VVM6 AP003033.1-201ENST00000527244 415 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms