Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-562P-201ENST00000362731 107 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-23P-201ENST00000363283 107 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-128P-201ENST00000383976 107 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 SNRPEP10-201ENST00000420249 274 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC139712.2-201ENST00000424302 339 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AL353572.1-201ENST00000442490 417 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AF186996.7-201ENST00000492781 209 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC011352.1-201ENST00000512300 793 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-1314P-201ENST00000517139 104 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 DEFB131C-201ENST00000528817 165 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AL161670.1-201ENST00000554348 137 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC016727.2-201ENST00000603988 621 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC009994.1-201ENST00000606889 253 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 AC068137.4-201ENST00000638485 296 ntBASIC1.74□□□□□ -2.13
SHROOM1Q2M3G4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 Y_RNA.6-201ENST00000362350 114 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-545P-201ENST00000362681 104 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU5B-2P-201ENST00000363036 113 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNA5SP493-201ENST00000364115 91 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-831P-201ENST00000384548 107 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 MIR517A-201ENST00000385001 87 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-373P-201ENST00000411247 98 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC132942.1-201ENST00000486753 483 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC114801.2-201ENST00000503825 781 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC019193.3-201ENST00000609144 554 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC007014.2-201ENST00000615581 479 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 AC009033.1-201ENST00000624279 431 ntBASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SHROOM1Q2M3G4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 RNU6-53P-201ENST00000365367 106 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 SNORD116-11-201ENST00000383882 92 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AL445305.1-201ENST00000432577 575 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC009474.2-201ENST00000451383 136 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 FO393415.2-201ENST00000480085 343 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC069439.1-201ENST00000494739 167 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 RPS23P5-201ENST00000495419 428 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 MTND1P5-201ENST00000517906 940 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 FGF7P1-201ENST00000582820 288 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 POLR3GP2-201ENST00000588366 668 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AC084782.3-201ENST00000612282 578 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 AL136221.1-201ENST00000621449 509 ntBASIC1.72□□□□□ -2.13
SHROOM1Q2M3G4 SNORD50.1-201ENST00000362987 71 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 MIR499A-201ENST00000384903 122 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 ZNF885P-201ENST00000420174 1098 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 MTND1P4-201ENST00000435196 415 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 Z82188.1-201ENST00000436709 154 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 MTND1P34-201ENST00000438556 671 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 NFU1P2-201ENST00000448700 469 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 AC087477.1-201ENST00000465747 340 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 RPS29P25-201ENST00000481709 171 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 AC010900.2-201ENST00000604508 210 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 AC005520.5-201ENST00000613926 164 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 AC093913.1-201ENST00000614178 329 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHROOM1Q2M3G4 LINC02555-201ENST00000563933 1951 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms