Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.15□□□□□ -2.23
VSX2P58304 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
VSX2P58304 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.15□□□□□ -2.23
VSX2P58304 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RPL17P51-201ENST00000605218 238 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC104458.1-201ENST00000608243 463 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC005562.2-201ENST00000618264 111 ntBASIC1.15□□□□□ -2.23
VSX2P58304 FER-210ENST00000628534 558 ntTSL 5 BASIC1.15□□□□□ -2.23
VSX2P58304 MIR338-201ENST00000636369 67 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.23
VSX2P58304 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
VSX2P58304 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VSX2P58304 BX322639.1-202ENST00000423987 2213 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RNU6-1019P-201ENST00000364424 107 ntBASIC1.14□□□□□ -2.23
VSX2P58304 RNU6-1119P-201ENST00000384349 108 ntBASIC1.14□□□□□ -2.23
VSX2P58304 RNU6-1106P-201ENST00000390845 107 ntBASIC1.14□□□□□ -2.23
VSX2P58304 CALM2P3-201ENST00000400429 449 ntBASIC1.14□□□□□ -2.23
VSX2P58304 RNU2-7P-201ENST00000410794 178 ntBASIC1.14□□□□□ -2.23
VSX2P58304 RNU6-325P-201ENST00000411132 105 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AL161935.2-201ENST00000414627 60 ntBASIC1.14□□□□□ -2.23
VSX2P58304 MTCO1P21-201ENST00000416634 589 ntBASIC1.14□□□□□ -2.23
VSX2P58304 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.14□□□□□ -2.23
VSX2P58304 AL135790.2-201ENST00000437701 267 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC083798.1-201ENST00000472671 131 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC083904.1-201ENST00000487828 231 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC099513.1-201ENST00000490423 301 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.14□□□□□ -2.23
VSX2P58304 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
VSX2P58304 RNU6-1332P-201ENST00000516666 104 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC026407.1-201ENST00000518369 204 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.14□□□□□ -2.23
VSX2P58304 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.14□□□□□ -2.23
VSX2P58304 CPDP1-201ENST00000579660 283 ntBASIC1.14□□□□□ -2.23
VSX2P58304 MIR4422-201ENST00000581938 83 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AP000907.4-201ENST00000604143 237 ntBASIC1.14□□□□□ -2.23
VSX2P58304 AC069114.2-201ENST00000604699 304 ntBASIC1.14□□□□□ -2.23
VSX2P58304 FAM157A-202ENST00000615155 405 ntBASIC1.14□□□□□ -2.23
VSX2P58304 MIR6863-201ENST00000636112 90 ntBASIC1.14□□□□□ -2.23
VSX2P58304 ICE2P2-201ENST00000483823 2787 ntBASIC1.14□□□□□ -2.23
VSX2P58304 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VSX2P58304 MTND5P26-201ENST00000426018 1752 ntBASIC1.13□□□□□ -2.23
VSX2P58304 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VSX2P58304 RNU6-1286P-201ENST00000383871 107 ntBASIC1.13□□□□□ -2.23
VSX2P58304 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.13□□□□□ -2.23
VSX2P58304 MRPS10P2-201ENST00000431226 381 ntBASIC1.13□□□□□ -2.23
VSX2P58304 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.13□□□□□ -2.23
VSX2P58304 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.13□□□□□ -2.23
VSX2P58304 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.13□□□□□ -2.23
VSX2P58304 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
VSX2P58304 Y_RNA.688-201ENST00000516565 95 ntBASIC1.13□□□□□ -2.23
VSX2P58304 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
VSX2P58304 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
VSX2P58304 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.13□□□□□ -2.23
VSX2P58304 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.13□□□□□ -2.23
VSX2P58304 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
VSX2P58304 MIR3611-201ENST00000584484 83 ntBASIC1.13□□□□□ -2.23
VSX2P58304 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
VSX2P58304 Y_RNA.372-201ENST00000365599 102 ntBASIC1.12□□□□□ -2.23
VSX2P58304 MIR194-1-201ENST00000384892 85 ntBASIC1.12□□□□□ -2.23
VSX2P58304 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
VSX2P58304 RNU6-648P-201ENST00000410190 107 ntBASIC1.12□□□□□ -2.23
VSX2P58304 RNU6-1068P-201ENST00000410958 103 ntBASIC1.12□□□□□ -2.23
VSX2P58304 AL359672.1-201ENST00000442302 409 ntBASIC1.12□□□□□ -2.23
VSX2P58304 RNU6-1208P-201ENST00000459588 107 ntBASIC1.12□□□□□ -2.23
VSX2P58304 Y_RNA.654-201ENST00000497848 106 ntBASIC1.12□□□□□ -2.23
VSX2P58304 AC019176.1-201ENST00000518519 225 ntBASIC1.12□□□□□ -2.23
VSX2P58304 FGF7P1-201ENST00000582820 288 ntBASIC1.12□□□□□ -2.23
VSX2P58304 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.12□□□□□ -2.23
VSX2P58304 Z99129.1-201ENST00000612510 255 ntBASIC1.12□□□□□ -2.23
VSX2P58304 TCL6_2.1-201ENST00000615162 119 ntBASIC1.12□□□□□ -2.23
VSX2P58304 AL158209.2-201ENST00000619266 216 ntBASIC1.12□□□□□ -2.23
VSX2P58304 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.12□□□□□ -2.23
VSX2P58304 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
VSX2P58304 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-522P-201ENST00000364497 107 ntBASIC1.11□□□□□ -2.23
VSX2P58304 Y_RNA.287-201ENST00000364853 94 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-968P-201ENST00000384076 107 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-975P-201ENST00000384296 105 ntBASIC1.11□□□□□ -2.23
VSX2P58304 SNORA67.2-201ENST00000384300 149 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
VSX2P58304 MIR521-1-201ENST00000384902 87 ntBASIC1.11□□□□□ -2.23
VSX2P58304 MIR514A2-201ENST00000385131 88 ntBASIC1.11□□□□□ -2.23
VSX2P58304 MIR514A3-201ENST00000385132 88 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-780P-201ENST00000391030 104 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNA5SP467-201ENST00000391274 118 ntBASIC1.11□□□□□ -2.23
VSX2P58304 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.11□□□□□ -2.23
VSX2P58304 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.11□□□□□ -2.23
VSX2P58304 AC027119.1-201ENST00000440877 241 ntBASIC1.11□□□□□ -2.23
VSX2P58304 NFU1P2-201ENST00000448700 469 ntBASIC1.11□□□□□ -2.23
VSX2P58304 AC112492.4-201ENST00000456549 352 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RPL23AP75-201ENST00000491601 451 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
VSX2P58304 SNORA19.2-201ENST00000516013 114 ntBASIC1.11□□□□□ -2.23
VSX2P58304 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.11□□□□□ -2.23
VSX2P58304 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms