Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU6-793P-201ENST00000384233 104 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AL136310.1-201ENST00000404926 654 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 MIR1197-201ENST00000408818 88 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 RNU6-57P-201ENST00000411348 103 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 RPS3AP3-201ENST00000411933 242 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.06□□□□□ -2.42
SRP9P49458 MTCYBP10-201ENST00000424905 650 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 STAG3L5P-204ENST00000443759 179 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.06□□□□□ -2.42
SRP9P49458 SNRPGP12-201ENST00000449481 213 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.06□□□□□ -2.42
SRP9P49458 AC010486.2-201ENST00000505572 483 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.06□□□□□ -2.42
SRP9P49458 RNU6-567P-201ENST00000516746 107 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.06□□□□□ -2.42
SRP9P49458 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.06□□□□□ -2.42
SRP9P49458 AL391840.1-201ENST00000571144 367 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 MIR3118-1-201ENST00000581787 76 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AC004832.4-201ENST00000608952 331 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 AC005520.5-201ENST00000613926 164 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.06□□□□□ -2.42
SRP9P49458 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.07□□□□□ -2.42
SRP9P49458 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 SNORD105-201ENST00000386910 85 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 RNU6-177P-201ENST00000411257 104 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC016909.1-201ENST00000415916 166 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AL353777.1-201ENST00000425552 326 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC067940.1-201ENST00000458411 300 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC010469.2-201ENST00000496412 480 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.07□□□□□ -2.42
SRP9P49458 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.07□□□□□ -2.42
SRP9P49458 SNORD111.1-201ENST00000516421 86 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 RNU4-77P-201ENST00000516692 156 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 RNA5SP330-201ENST00000517096 96 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC022868.1-201ENST00000517767 391 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.07□□□□□ -2.42
SRP9P49458 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.07□□□□□ -2.42
SRP9P49458 MIR3192-201ENST00000584920 77 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC121334.2-201ENST00000605387 271 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC064807.4-201ENST00000607201 407 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.07□□□□□ -2.42
SRP9P49458 AL136317.1-201ENST00000612653 226 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 AC008250.2-201ENST00000615261 205 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.07□□□□□ -2.42
SRP9P49458 AC073544.1-201ENST00000600110 1595 ntBASIC-0.07□□□□□ -2.42
SRP9P49458 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
SRP9P49458 MIR103A2-201ENST00000362154 78 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 RNU6-39P-201ENST00000384344 107 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.08□□□□□ -2.42
SRP9P49458 CALM2P4-201ENST00000430810 426 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 SNAP23P1-201ENST00000433229 246 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.08□□□□□ -2.42
SRP9P49458 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 MTCO1P19-201ENST00000443487 500 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AC007327.1-201ENST00000447461 264 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 MTCO2P18-201ENST00000457151 658 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.08□□□□□ -2.42
SRP9P49458 RNA5SP337-201ENST00000517007 109 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.08□□□□□ -2.42
SRP9P49458 MIR4307-201ENST00000582802 84 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AL139022.2-201ENST00000606934 443 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AL512506.1-201ENST00000613918 449 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AC007014.2-201ENST00000615581 479 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 SEPT14P17-201ENST00000617978 177 ntBASIC-0.08□□□□□ -2.42
SRP9P49458 AL589826.1-201ENST00000340697 249 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 RNU6-994P-201ENST00000410507 111 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 AL663109.1-201ENST00000411498 844 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 AC012306.1-201ENST00000423267 114 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.09□□□□□ -2.42
SRP9P49458 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.09□□□□□ -2.42
SRP9P49458 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.09□□□□□ -2.42
SRP9P49458 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.09□□□□□ -2.42
SRP9P49458 TPT1P7-201ENST00000458300 517 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.09□□□□□ -2.42
SRP9P49458 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
SRP9P49458 MTND1P15-201ENST00000579262 949 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 AC004223.2-201ENST00000590309 544 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 AL158042.1-201ENST00000605338 460 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
SRP9P49458 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 U8.16-201ENST00000391279 133 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 AC004386.2-201ENST00000441858 148 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 MTND1P12-201ENST00000455231 147 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 AC008628.2-201ENST00000502605 298 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 RNU6-201P-201ENST00000517100 61 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 AC022616.6-201ENST00000520479 119 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 MIR5006-201ENST00000583027 110 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 AL162424.1-201ENST00000602325 221 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 MTND3P19-201ENST00000603825 345 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 PART1_2.1-201ENST00000612397 250 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 AC005562.2-201ENST00000618264 111 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.1□□□□□ -2.43
SRP9P49458 SNORA43.4-201ENST00000629559 138 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms