Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL133215.3-201ENST00000609801 448 ntBASIC1.23□□□□□ -2.21
CX3CR1P49238 DISC2.1-201ENST00000612827 205 ntBASIC1.23□□□□□ -2.21
CX3CR1P49238 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.23□□□□□ -2.21
CX3CR1P49238 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CX3CR1P49238 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
CX3CR1P49238 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
CX3CR1P49238 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 U8.1-201ENST00000362843 134 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU1-96P-201ENST00000364163 162 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU6-1019P-201ENST00000364424 107 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU6-877P-201ENST00000383868 107 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU6-95P-201ENST00000384697 107 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 SNORA67.5-201ENST00000391036 107 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 ARL5AP1-201ENST00000418991 388 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
CX3CR1P49238 FTH1P12-201ENST00000432137 551 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL121890.1-201ENST00000435457 205 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL135790.2-201ENST00000437701 267 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
CX3CR1P49238 AC079354.2-201ENST00000453523 154 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 HMGN2P9-201ENST00000476875 229 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.22□□□□□ -2.21
CX3CR1P49238 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU6-1041P-201ENST00000516254 102 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 MIR3672-201ENST00000584290 82 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AC146944.4-201ENST00000602697 718 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL138726.1-201ENST00000614873 333 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AC015540.1-201ENST00000615828 501 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AC090617.10-201ENST00000624308 134 ntBASIC1.22□□□□□ -2.21
CX3CR1P49238 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.22□□□□□ -2.21
CX3CR1P49238 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CX3CR1P49238 RNU6-418P-201ENST00000384035 107 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 RNU6-784P-201ENST00000384330 106 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 Y_RNA.516-201ENST00000384541 124 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 SNORD116-4-201ENST00000384733 96 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 MIR521-1-201ENST00000384902 87 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.21□□□□□ -2.22
CX3CR1P49238 MTCO1P21-201ENST00000416634 589 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 NDUFA5P4-201ENST00000436704 385 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 Z82188.1-201ENST00000436709 154 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 MTCO3P8-201ENST00000453691 755 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 MTCO1P29-201ENST00000496868 288 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 AC105313.1-201ENST00000509121 353 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CX3CR1P49238 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
CX3CR1P49238 AC026371.1-201ENST00000551867 419 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.21□□□□□ -2.22
CX3CR1P49238 EIF1P4-201ENST00000572664 335 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 MIR3942-201ENST00000585264 109 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 MIR8076-201ENST00000611401 83 ntBASIC1.21□□□□□ -2.22
CX3CR1P49238 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.21□□□□□ -2.22
CX3CR1P49238 Y_RNA.135-201ENST00000363439 95 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNU6-968P-201ENST00000384076 107 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNU6-214P-201ENST00000384130 107 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 U8.10-201ENST00000384260 133 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNA5SP494-201ENST00000410653 129 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.2□□□□□ -2.22
CX3CR1P49238 AC004386.2-201ENST00000441858 148 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.2□□□□□ -2.22
CX3CR1P49238 AC016717.1-201ENST00000448918 286 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 U8.21-201ENST00000459536 136 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RPL23AP75-201ENST00000491601 451 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNU6-720P-201ENST00000516363 108 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 RNA5SP481-201ENST00000516814 122 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 MTND1P35-201ENST00000526739 508 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.2□□□□□ -2.22
CX3CR1P49238 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.2□□□□□ -2.22
CX3CR1P49238 AC016256.1-201ENST00000547971 354 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 FGF7P1-201ENST00000582820 288 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 AL136221.1-201ENST00000621449 509 ntBASIC1.2□□□□□ -2.22
CX3CR1P49238 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.2□□□□□ -2.22
CX3CR1P49238 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 Y_RNA.212-201ENST00000364177 102 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CX3CR1P49238 RNU6-1106P-201ENST00000390845 107 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 RPS26P42-201ENST00000413485 326 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 SNRPEP10-201ENST00000420249 274 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 OR2AQ1P-201ENST00000451972 200 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.19□□□□□ -2.22
CX3CR1P49238 RPS29P25-201ENST00000481709 171 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC019176.1-201ENST00000518519 225 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.19□□□□□ -2.22
CX3CR1P49238 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms