Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.25□□□□□ -2.21
RFX3P48380 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
RFX3P48380 MRPS10P2-201ENST00000431226 381 ntBASIC1.25□□□□□ -2.21
RFX3P48380 AL135790.2-201ENST00000437701 267 ntBASIC1.25□□□□□ -2.21
RFX3P48380 SEPT14P3-201ENST00000439401 183 ntBASIC1.25□□□□□ -2.21
RFX3P48380 AC069257.2-201ENST00000441819 155 ntBASIC1.25□□□□□ -2.21
RFX3P48380 AL732372.2-207ENST00000445840 183 ntBASIC1.25□□□□□ -2.21
RFX3P48380 SEPT14P2-201ENST00000453405 183 ntBASIC1.25□□□□□ -2.21
RFX3P48380 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.25□□□□□ -2.21
RFX3P48380 snoU13.6-201ENST00000458785 104 ntBASIC1.25□□□□□ -2.21
RFX3P48380 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.25□□□□□ -2.21
RFX3P48380 AC092436.3-201ENST00000511788 257 ntBASIC1.25□□□□□ -2.21
RFX3P48380 SEPT14P4-201ENST00000513445 186 ntBASIC1.25□□□□□ -2.21
RFX3P48380 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.25□□□□□ -2.21
RFX3P48380 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.25□□□□□ -2.21
RFX3P48380 FO082796.1-201ENST00000523795 183 ntBASIC1.25□□□□□ -2.21
RFX3P48380 AP005136.1-201ENST00000579765 429 ntBASIC1.25□□□□□ -2.21
RFX3P48380 PIGPP4-201ENST00000584447 307 ntBASIC1.25□□□□□ -2.21
RFX3P48380 MIR4753-201ENST00000585119 83 ntBASIC1.25□□□□□ -2.21
RFX3P48380 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
RFX3P48380 AL353149.1-201ENST00000610667 244 ntBASIC1.25□□□□□ -2.21
RFX3P48380 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.25□□□□□ -2.21
RFX3P48380 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
RFX3P48380 Y_RNA.164-201ENST00000363709 102 ntBASIC1.24□□□□□ -2.21
RFX3P48380 Y_RNA.167-201ENST00000363735 109 ntBASIC1.24□□□□□ -2.21
RFX3P48380 Y_RNA.231-201ENST00000364358 102 ntBASIC1.24□□□□□ -2.21
RFX3P48380 RNU6-128P-201ENST00000383976 107 ntBASIC1.24□□□□□ -2.21
RFX3P48380 RNU6-784P-201ENST00000384330 106 ntBASIC1.24□□□□□ -2.21
RFX3P48380 RNU6-933P-201ENST00000384424 107 ntBASIC1.24□□□□□ -2.21
RFX3P48380 MIR320B2-201ENST00000408479 138 ntBASIC1.24□□□□□ -2.21
RFX3P48380 MIR1283-1-201ENST00000408494 87 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX3P48380 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX3P48380 MTCO1P20-201ENST00000425366 358 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX3P48380 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX3P48380 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX3P48380 MTND1P29-201ENST00000448112 647 ntBASIC1.24□□□□□ -2.21
RFX3P48380 OR2AQ1P-201ENST00000451972 200 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AC007215.1-201ENST00000464893 276 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AC114982.1-201ENST00000469402 321 ntBASIC1.24□□□□□ -2.21
RFX3P48380 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX3P48380 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
RFX3P48380 RNU6-948P-201ENST00000516374 107 ntBASIC1.24□□□□□ -2.21
RFX3P48380 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.21
RFX3P48380 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.24□□□□□ -2.21
RFX3P48380 AC084364.2-201ENST00000546924 395 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AC005668.1-201ENST00000571142 476 ntBASIC1.24□□□□□ -2.21
RFX3P48380 SNRPGP20-201ENST00000604477 205 ntBASIC1.24□□□□□ -2.21
RFX3P48380 MIR3976-201ENST00000606807 139 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AC068137.3-201ENST00000639191 341 ntBASIC1.24□□□□□ -2.21
RFX3P48380 AL391987.6-201ENST00000305671 199 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU6-545P-201ENST00000362681 104 ntBASIC1.23□□□□□ -2.21
RFX3P48380 Y_RNA.51-201ENST00000362725 102 ntBASIC1.23□□□□□ -2.21
RFX3P48380 Y_RNA.123-201ENST00000363338 102 ntBASIC1.23□□□□□ -2.21
RFX3P48380 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AL117342.1-201ENST00000404861 406 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU2-16P-201ENST00000410712 136 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU6-325P-201ENST00000411132 105 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AC004965.1-201ENST00000413033 213 ntBASIC1.23□□□□□ -2.21
RFX3P48380 ERLEC1P1-201ENST00000433806 578 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX3P48380 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AC009237.7-201ENST00000447357 229 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AC091435.1-201ENST00000505442 584 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.23□□□□□ -2.21
RFX3P48380 RNU6-1041P-201ENST00000516254 102 ntBASIC1.23□□□□□ -2.21
RFX3P48380 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.23□□□□□ -2.21
RFX3P48380 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.23□□□□□ -2.21
RFX3P48380 AL512360.1-201ENST00000555346 234 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU6-89P-201ENST00000606519 100 ntBASIC1.23□□□□□ -2.21
RFX3P48380 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.23□□□□□ -2.21
RFX3P48380 MTND4P5-201ENST00000435821 1374 ntBASIC1.22□□□□□ -2.21
RFX3P48380 OR4G1P-203ENST00000641984 1631 ntBASIC1.22□□□□□ -2.21
RFX3P48380 BX322639.1-202ENST00000423987 2213 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU1-96P-201ENST00000364163 162 ntBASIC1.22□□□□□ -2.21
RFX3P48380 SNORA63D-201ENST00000364359 132 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU6-522P-201ENST00000364497 107 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU6-877P-201ENST00000383868 107 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU6-1235P-201ENST00000384559 107 ntBASIC1.22□□□□□ -2.21
RFX3P48380 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
RFX3P48380 CALM2P3-201ENST00000400429 449 ntBASIC1.22□□□□□ -2.21
RFX3P48380 MIR450B-201ENST00000401182 78 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU2-7P-201ENST00000410794 178 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AL161935.2-201ENST00000414627 60 ntBASIC1.22□□□□□ -2.21
RFX3P48380 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.22□□□□□ -2.21
RFX3P48380 CST2P1-201ENST00000425770 87 ntBASIC1.22□□□□□ -2.21
RFX3P48380 MTCO3P29-201ENST00000432119 779 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC004386.2-201ENST00000441858 148 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC074290.1-201ENST00000448883 135 ntBASIC1.22□□□□□ -2.21
RFX3P48380 RNU6-498P-201ENST00000459468 107 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
RFX3P48380 TRBVA-201ENST00000498804 316 ntBASIC1.22□□□□□ -2.21
RFX3P48380 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC079140.2-201ENST00000506193 142 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
RFX3P48380 DEFB131C-201ENST00000528817 165 ntBASIC1.22□□□□□ -2.21
RFX3P48380 AC026371.1-201ENST00000551867 419 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms