Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR6715A-201ENST00000615929 79 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC103705.1-201ENST00000619013 241 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC009509.4-201ENST00000619202 509 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AL136221.1-201ENST00000621449 509 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC090582.1-201ENST00000636321 199 ntBASIC1.24□□□□□ -2.21
SSR1P43307 Y_RNA.167-201ENST00000363735 109 ntBASIC1.23□□□□□ -2.21
SSR1P43307 Y_RNA.287-201ENST00000364853 94 ntBASIC1.23□□□□□ -2.21
SSR1P43307 RNU6-1286P-201ENST00000383871 107 ntBASIC1.23□□□□□ -2.21
SSR1P43307 SNORA69-201ENST00000383895 132 ntBASIC1.23□□□□□ -2.21
SSR1P43307 SNORD116-8-201ENST00000384365 95 ntBASIC1.23□□□□□ -2.21
SSR1P43307 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SSR1P43307 RPL23AP36-201ENST00000413895 458 ntBASIC1.23□□□□□ -2.21
SSR1P43307 EBAG9P1-201ENST00000418955 543 ntBASIC1.23□□□□□ -2.21
SSR1P43307 MTCO3P29-201ENST00000432119 779 ntBASIC1.23□□□□□ -2.21
SSR1P43307 AC005002.2-201ENST00000438228 269 ntBASIC1.23□□□□□ -2.21
SSR1P43307 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.23□□□□□ -2.21
SSR1P43307 RNU7-34P-201ENST00000459394 64 ntBASIC1.23□□□□□ -2.21
SSR1P43307 RNU6-261P-201ENST00000459506 102 ntBASIC1.23□□□□□ -2.21
SSR1P43307 SNORA19.2-201ENST00000516013 114 ntBASIC1.23□□□□□ -2.21
SSR1P43307 AC087854.1-201ENST00000519706 414 ntBASIC1.23□□□□□ -2.21
SSR1P43307 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SSR1P43307 AL442163.3-201ENST00000554110 156 ntBASIC1.23□□□□□ -2.21
SSR1P43307 MIR4742-201ENST00000581069 85 ntBASIC1.23□□□□□ -2.21
SSR1P43307 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.23□□□□□ -2.21
SSR1P43307 AC009033.1-201ENST00000624279 431 ntBASIC1.23□□□□□ -2.21
SSR1P43307 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.22□□□□□ -2.21
SSR1P43307 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SSR1P43307 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SSR1P43307 Y_RNA.372-201ENST00000365599 102 ntBASIC1.22□□□□□ -2.21
SSR1P43307 RNU6-975P-201ENST00000384296 105 ntBASIC1.22□□□□□ -2.21
SSR1P43307 MIR194-1-201ENST00000384892 85 ntBASIC1.22□□□□□ -2.21
SSR1P43307 AL049545.1-201ENST00000401856 572 ntBASIC1.22□□□□□ -2.21
SSR1P43307 AC016909.1-201ENST00000415916 166 ntBASIC1.22□□□□□ -2.21
SSR1P43307 MTCO1P21-201ENST00000416634 589 ntBASIC1.22□□□□□ -2.21
SSR1P43307 BTF3P4-201ENST00000418852 495 ntBASIC1.22□□□□□ -2.21
SSR1P43307 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
SSR1P43307 NFU1P2-201ENST00000448700 469 ntBASIC1.22□□□□□ -2.21
SSR1P43307 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.22□□□□□ -2.21
SSR1P43307 MTND3P16-201ENST00000452205 344 ntBASIC1.22□□□□□ -2.21
SSR1P43307 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.22□□□□□ -2.21
SSR1P43307 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.22□□□□□ -2.21
SSR1P43307 SCOCP1-201ENST00000554676 349 ntBASIC1.22□□□□□ -2.21
SSR1P43307 TPRKBP2-201ENST00000565969 475 ntBASIC1.22□□□□□ -2.21
SSR1P43307 MIR3941-201ENST00000582572 103 ntBASIC1.22□□□□□ -2.21
SSR1P43307 AC023043.2-201ENST00000589678 1026 ntBASIC1.22□□□□□ -2.21
SSR1P43307 FAM157A-202ENST00000615155 405 ntBASIC1.22□□□□□ -2.21
SSR1P43307 TCL6_2.1-201ENST00000615162 119 ntBASIC1.22□□□□□ -2.21
SSR1P43307 ZNF204P-201ENST00000416749 2397 ntBASIC1.22□□□□□ -2.21
SSR1P43307 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
SSR1P43307 RNU6-1252P-201ENST00000363054 104 ntBASIC1.21□□□□□ -2.22
SSR1P43307 RNU6-780P-201ENST00000391030 104 ntBASIC1.21□□□□□ -2.22
SSR1P43307 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.21□□□□□ -2.22
SSR1P43307 Z82205.1-201ENST00000428456 297 ntBASIC1.21□□□□□ -2.22
SSR1P43307 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.21□□□□□ -2.22
SSR1P43307 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
SSR1P43307 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
SSR1P43307 HMGB1P29-201ENST00000505659 499 ntBASIC1.21□□□□□ -2.22
SSR1P43307 AC104383.1-201ENST00000530297 370 ntBASIC1.21□□□□□ -2.22
SSR1P43307 MIR4524B-201ENST00000581569 115 ntBASIC1.21□□□□□ -2.22
SSR1P43307 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.21□□□□□ -2.22
SSR1P43307 AL929325.1-201ENST00000603096 117 ntBASIC1.21□□□□□ -2.22
SSR1P43307 snoU2-30.2-201ENST00000362805 70 ntBASIC1.2□□□□□ -2.22
SSR1P43307 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
SSR1P43307 MIR300-201ENST00000401138 83 ntBASIC1.2□□□□□ -2.22
SSR1P43307 CDK8P2-201ENST00000415020 547 ntBASIC1.2□□□□□ -2.22
SSR1P43307 COX6CP10-201ENST00000416832 224 ntBASIC1.2□□□□□ -2.22
SSR1P43307 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
SSR1P43307 Z82188.1-201ENST00000436709 154 ntBASIC1.2□□□□□ -2.22
SSR1P43307 RNU7-187P-201ENST00000458985 68 ntBASIC1.2□□□□□ -2.22
SSR1P43307 U8.21-201ENST00000459536 136 ntBASIC1.2□□□□□ -2.22
SSR1P43307 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
SSR1P43307 AC091133.4-201ENST00000511142 308 ntBASIC1.2□□□□□ -2.22
SSR1P43307 SUMO2P16-201ENST00000519475 264 ntBASIC1.2□□□□□ -2.22
SSR1P43307 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.2□□□□□ -2.22
SSR1P43307 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.2□□□□□ -2.22
SSR1P43307 SCARNA4-201ENST00000629045 128 ntBASIC1.2□□□□□ -2.22
SSR1P43307 MIR6863-201ENST00000636112 90 ntBASIC1.2□□□□□ -2.22
SSR1P43307 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SSR1P43307 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RNU6-1068P-201ENST00000410958 103 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.19□□□□□ -2.22
SSR1P43307 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.19□□□□□ -2.22
SSR1P43307 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SSR1P43307 AL359672.1-201ENST00000442302 409 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AC009237.7-201ENST00000447357 229 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AL163195.1-201ENST00000496941 348 ntBASIC1.19□□□□□ -2.22
SSR1P43307 HMGN1P12-201ENST00000499125 195 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AC103851.1-201ENST00000506833 274 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RNU6-948P-201ENST00000516374 107 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RNA5SP481-201ENST00000516814 122 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
SSR1P43307 MTND1P35-201ENST00000526739 508 ntBASIC1.19□□□□□ -2.22
SSR1P43307 MIR4709-201ENST00000577272 72 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.19□□□□□ -2.22
SSR1P43307 RPL17P51-201ENST00000605218 238 ntBASIC1.19□□□□□ -2.22
SSR1P43307 RN7SKP299-201ENST00000606679 301 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AC004492.1-201ENST00000607036 742 ntBASIC1.19□□□□□ -2.22
SSR1P43307 AL353149.1-201ENST00000610667 244 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms