Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RNU6-1208P-201ENST00000459588 107 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.32□□□□□ -2.2
CAPN1P07384 AC092436.3-201ENST00000511788 257 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 Y_RNA.673-201ENST00000516306 88 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 RNU6-856P-201ENST00000516959 98 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.32□□□□□ -2.2
CAPN1P07384 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.32□□□□□ -2.2
CAPN1P07384 SCOCP1-201ENST00000554676 349 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AL157687.1-201ENST00000554853 619 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 Z99129.1-201ENST00000612510 255 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 FAM157A-202ENST00000615155 405 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 TCL6_2.1-201ENST00000615162 119 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.32□□□□□ -2.2
CAPN1P07384 FER-210ENST00000628534 558 ntTSL 5 BASIC1.32□□□□□ -2.2
CAPN1P07384 Y_RNA.51-201ENST00000362725 102 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 RNU6-259P-201ENST00000383999 107 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 MIR549A-201ENST00000385268 96 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CAPN1P07384 CALM2P3-201ENST00000400429 449 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.31□□□□□ -2.2
CAPN1P07384 CST2P1-201ENST00000425770 87 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.31□□□□□ -2.2
CAPN1P07384 AL359672.1-201ENST00000442302 409 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.31□□□□□ -2.2
CAPN1P07384 RPS26P45-201ENST00000471748 340 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 MRPS36P4-201ENST00000534436 298 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.31□□□□□ -2.2
CAPN1P07384 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
CAPN1P07384 AC016727.2-201ENST00000603988 621 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 AP000907.4-201ENST00000604143 237 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 RMST_3.1-201ENST00000611651 109 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 MTND5P35-201ENST00000557537 1720 ntBASIC1.31□□□□□ -2.2
CAPN1P07384 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
CAPN1P07384 Y_RNA.123-201ENST00000363338 102 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 RNU6-1286P-201ENST00000383871 107 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 RNU6-933P-201ENST00000384424 107 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 MTCO3P40-201ENST00000392516 676 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 MIR1253-201ENST00000408273 105 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 RNU6-325P-201ENST00000411132 105 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
CAPN1P07384 MRPS10P2-201ENST00000431226 381 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 AC245047.4-201ENST00000433189 144 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.3□□□□□ -2.2
CAPN1P07384 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 RNA5SP384-201ENST00000516615 116 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 RNA5SP437-201ENST00000517249 129 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.3□□□□□ -2.2
CAPN1P07384 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.3□□□□□ -2.2
CAPN1P07384 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.3□□□□□ -2.2
CAPN1P07384 SNRPGP20-201ENST00000604477 205 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 AC245008.1-201ENST00000608123 476 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.3□□□□□ -2.2
CAPN1P07384 OR5AK4P-201ENST00000635912 903 ntBASIC1.3□□□□□ -2.2
CAPN1P07384 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CAPN1P07384 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-1085P-201ENST00000363576 107 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-522P-201ENST00000364497 107 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-214P-201ENST00000384130 107 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-1042P-201ENST00000384204 107 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-780P-201ENST00000391030 104 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 MRPL35P1-201ENST00000404272 572 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AL117342.1-201ENST00000404861 406 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC004866.1-201ENST00000411748 78 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.29□□□□□ -2.2
CAPN1P07384 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.29□□□□□ -2.2
CAPN1P07384 AC004386.2-201ENST00000441858 148 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC099513.1-201ENST00000490423 301 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AF186996.7-201ENST00000492781 209 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC091885.1-201ENST00000506658 268 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 RNU6-1332P-201ENST00000516666 104 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC126177.8-201ENST00000618339 1015 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AL359880.1-201ENST00000621879 266 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 AC124864.2-201ENST00000624736 186 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.29□□□□□ -2.2
CAPN1P07384 BX322639.1-202ENST00000423987 2213 ntBASIC1.29□□□□□ -2.2
CAPN1P07384 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 RNU6-968P-201ENST00000384076 107 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 Y_RNA.481-201ENST00000384373 102 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 MIR548B-201ENST00000385247 97 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 EIF4E2P1-201ENST00000393781 255 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 MIR1287-201ENST00000408492 90 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 RNU6-1068P-201ENST00000410958 103 ntBASIC1.28□□□□□ -2.2
CAPN1P07384 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms