Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 SNORA2A-201ENST00000383885 135 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 MIR1253-201ENST00000408273 105 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 MIR1283-1-201ENST00000408494 87 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AL663109.1-201ENST00000411498 844 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 MTCO1P17-201ENST00000411522 491 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.47□□□□□ -2.48
SSSCA1O60232 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.47□□□□□ -2.48
SSSCA1O60232 MTND4P15-201ENST00000437913 1033 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC005002.2-201ENST00000438228 269 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC093850.1-201ENST00000454121 251 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.47□□□□□ -2.48
SSSCA1O60232 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 RN7SKP287-201ENST00000516546 266 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.47□□□□□ -2.48
SSSCA1O60232 AP002453.2-201ENST00000533503 320 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.47□□□□□ -2.48
SSSCA1O60232 MIR5708-201ENST00000579723 85 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC005730.3-201ENST00000583067 366 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 MIR548AC-201ENST00000585049 88 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 DEFB131E-202ENST00000602581 683 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC068790.2-201ENST00000602601 557 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC174048.1-201ENST00000603389 144 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AL670379.3-201ENST00000605040 251 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 AC104458.1-201ENST00000608243 463 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 SNORA9.1-201ENST00000362412 131 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNA5SP98-201ENST00000363158 137 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 SNORA25.3-201ENST00000363205 127 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNU6-792P-201ENST00000363490 107 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNU6-650P-201ENST00000365658 111 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNU6-946P-201ENST00000383878 107 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 MIR300-201ENST00000401138 83 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 MRPS10P2-201ENST00000431226 381 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNA5SP94-201ENST00000516917 108 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC105185.1-201ENST00000518705 535 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC027288.2-201ENST00000553028 243 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.48□□□□□ -2.49
SSSCA1O60232 MIR4743-201ENST00000584576 69 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 MIR4753-201ENST00000585119 83 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AL162424.1-201ENST00000602325 221 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AC007684.1-201ENST00000609671 477 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 AL109933.3-201ENST00000619095 188 ntBASIC-0.48□□□□□ -2.49
SSSCA1O60232 RNU6-674P-201ENST00000363831 107 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 RNU6-654P-201ENST00000364373 107 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.49□□□□□ -2.49
SSSCA1O60232 RNU6-43P-201ENST00000384302 107 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 SNORA8.2-201ENST00000384372 139 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 AC010975.2-201ENST00000427781 588 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 AL049829.1-201ENST00000465411 156 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.49□□□□□ -2.49
SSSCA1O60232 RNU6-948P-201ENST00000516374 107 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 Z99497.2-201ENST00000603634 310 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 AC011921.3-201ENST00000605540 361 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SSSCA1O60232 AC098679.4-201ENST00000624241 654 ntBASIC-0.49□□□□□ -2.49
SSSCA1O60232 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 SNORA8.3-201ENST00000384679 139 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 MIR520G-201ENST00000385064 90 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 MIR520H-201ENST00000385126 88 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.5□□□□□ -2.49
SSSCA1O60232 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SSSCA1O60232 AC010376.1-201ENST00000522101 334 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 MTCO3P15-201ENST00000526563 574 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.5□□□□□ -2.49
SSSCA1O60232 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.5□□□□□ -2.49
SSSCA1O60232 AC069545.1-201ENST00000605671 358 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 PART1_2.1-201ENST00000612397 250 ntBASIC-0.5□□□□□ -2.49
SSSCA1O60232 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 MIR549A-201ENST00000385268 96 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.51□□□□□ -2.49
SSSCA1O60232 AL953862.1-201ENST00000423016 168 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AL590632.1-201ENST00000424289 371 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 CALM2P4-201ENST00000430810 426 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC091021.1-201ENST00000468051 388 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC104692.1-201ENST00000472406 90 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 RNA5SP285-201ENST00000516619 119 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC026616.1-201ENST00000523157 525 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AL512347.1-201ENST00000566420 503 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AL391840.1-201ENST00000571144 367 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC078795.3-201ENST00000602913 472 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AL359075.3-201ENST00000613288 217 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 AC240442.1-201ENST00000616055 283 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 FTX_2.1-201ENST00000618816 94 ntBASIC-0.51□□□□□ -2.49
SSSCA1O60232 RNA5SP457-201ENST00000363657 124 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms