Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 ZNF299P-201ENST00000406845 1804 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAFD1O14545 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
TRAFD1O14545 U3.9-201ENST00000363823 204 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 RNU6-596P-201ENST00000365395 98 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 SNORA18.2-201ENST00000383865 132 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.405-201ENST00000383979 100 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.419-201ENST00000384041 102 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.451-201ENST00000384200 100 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.524-201ENST00000384564 100 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.561-201ENST00000384694 100 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 RNY4P36-201ENST00000391116 96 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 MTCYBP2-201ENST00000407745 171 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 RNU2-41P-201ENST00000410991 178 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AC022028.1-201ENST00000412054 408 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAFD1O14545 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAFD1O14545 MIR2053-201ENST00000459295 91 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAFD1O14545 Y_RNA.718-201ENST00000517110 102 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 RNU6-667P-201ENST00000517186 102 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AC090517.1-201ENST00000569307 266 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 MIR5690-201ENST00000583739 73 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AC016727.2-201ENST00000603988 621 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAFD1O14545 MIR1248-201ENST00000629190 106 ntBASIC1.9□□□□□ -2.11
TRAFD1O14545 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 RNU6-595P-201ENST00000363944 107 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 RNU4-9P-201ENST00000364951 139 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 SNORA25B-201ENST00000365507 128 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAFD1O14545 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAFD1O14545 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAFD1O14545 Y_RNA.653-201ENST00000459091 95 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAFD1O14545 AC097473.1-201ENST00000508142 408 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 RNU6-567P-201ENST00000516746 107 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 DEFB131C-201ENST00000528817 165 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 EIF4A1P12-201ENST00000551910 141 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAFD1O14545 MIR1244-1-201ENST00000612829 85 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 SCARNA4-201ENST00000629045 128 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 MIR1244-3-201ENST00000635744 85 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 MIR1244-2-201ENST00000636449 85 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 MIR1244-4-202ENST00000636813 85 ntBASIC1.89□□□□□ -2.11
TRAFD1O14545 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TRAFD1O14545 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRAFD1O14545 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAFD1O14545 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAFD1O14545 RNU6-222P-201ENST00000362438 107 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 RNY1P16-201ENST00000363063 111 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 SNORD115-3-201ENST00000363100 82 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 RNU6-99P-201ENST00000364721 107 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 MIR561-201ENST00000385216 97 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 MT-TD-201ENST00000387419 68 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 MIR1294-201ENST00000408503 142 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC092423.1-201ENST00000430165 186 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 OR2AQ1P-201ENST00000451972 200 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAFD1O14545 snoU13.30-201ENST00000458951 104 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 RNU7-87P-201ENST00000459343 62 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 SNORD19B-201ENST00000459623 84 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC022493.2-201ENST00000506122 481 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAFD1O14545 RNU6-991P-201ENST00000516168 107 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AL590705.4-201ENST00000532209 134 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAFD1O14545 UBL5P4-201ENST00000562584 236 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 C8orf59P2-201ENST00000603441 271 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AL133255.1-201ENST00000606374 441 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC025754.2-201ENST00000606491 432 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AL355802.3-201ENST00000607571 545 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AC104985.2-201ENST00000620598 500 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 AL359697.1-201ENST00000624879 587 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 ZNF204P-201ENST00000416749 2397 ntBASIC1.88□□□□□ -2.11
TRAFD1O14545 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAFD1O14545 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAFD1O14545 RNU6-874P-201ENST00000362390 105 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 RNU4-79P-201ENST00000362764 141 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 U8.10-201ENST00000384260 133 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 SNORA12.2-201ENST00000391040 156 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAFD1O14545 AC105758.1-201ENST00000506038 399 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAFD1O14545 RNU7-175P-201ENST00000515915 61 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 RNU6-1098P-201ENST00000516772 96 ntBASIC1.87□□□□□ -2.11
TRAFD1O14545 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAFD1O14545 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAFD1O14545 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms