Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 Z69720.2-201ENST00000624755 279 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 SNORD98-201ENST00000636377 67 ntBASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
COL6A6A6NMZ7 RNU6-227P-201ENST00000362865 103 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU6-266P-201ENST00000364225 107 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU6-384P-201ENST00000364900 104 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU5A-6P-201ENST00000384136 116 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 SNORA8-201ENST00000384574 139 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MIR218-1-201ENST00000384999 110 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1158P-201ENST00000391167 107 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MTATP6P18-201ENST00000417994 673 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 HSPE1P21-201ENST00000438283 308 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RPS20P10-201ENST00000451209 253 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC008628.2-201ENST00000502605 298 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC010424.1-201ENST00000506336 297 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC010486.3-201ENST00000511602 785 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 SNORD60.2-201ENST00000516883 86 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC060788.1-201ENST00000521318 469 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MRPS36P4-201ENST00000534436 298 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AL160236.1-201ENST00000556317 195 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC146944.4-201ENST00000602697 718 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC025449.1-201ENST00000603896 529 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC064807.4-201ENST00000607201 407 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC073114.1-201ENST00000612027 490 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC103705.1-201ENST00000619013 241 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AL450472.1-202ENST00000637286 180 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC099654.12-201ENST00000639868 649 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MTND4P14-201ENST00000435799 1354 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MTND5P26-201ENST00000426018 1752 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.151-201ENST00000363566 112 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.167-201ENST00000363735 109 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.194-201ENST00000363985 102 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU1-96P-201ENST00000364163 162 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP331-201ENST00000364986 107 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU6-715P-201ENST00000365204 103 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.359-201ENST00000365498 102 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 SNORA16.2-201ENST00000390991 127 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AL606923.1-201ENST00000406616 190 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1068P-201ENST00000410958 103 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 C1DP2-201ENST00000418167 426 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MTCO2P16-201ENST00000436962 677 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 DAP3P1-201ENST00000441522 278 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RPS29P27-201ENST00000463711 170 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP137-201ENST00000516833 135 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 AC092807.2-201ENST00000609367 243 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RMST_3.1-201ENST00000611651 109 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 MIR1248-201ENST00000629190 106 ntBASIC0.64□□□□□ -2.31
COL6A6A6NMZ7 RNU4-15P-201ENST00000362613 141 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU6-843P-201ENST00000384454 104 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU6-550P-201ENST00000391057 101 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MTCO2P7-201ENST00000446518 666 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC016632.1-201ENST00000503994 196 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MIR4703-201ENST00000577728 79 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MIR4299-201ENST00000577899 72 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 CPDP1-201ENST00000579660 283 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC087683.1-201ENST00000591187 441 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC091805.2-201ENST00000603848 235 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC010900.2-201ENST00000604508 210 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU6-89P-201ENST00000606519 100 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AP001330.5-201ENST00000607176 411 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AL590240.4-201ENST00000616908 390 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC120349.3-201ENST00000624377 529 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU5B-2P-201ENST00000363036 113 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.231-201ENST00000364358 102 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MIR1267-201ENST00000408723 78 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU6-648P-201ENST00000410190 107 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC092809.3-201ENST00000415453 231 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MTCO1P21-201ENST00000416634 589 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AL590135.1-201ENST00000422215 156 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC019205.3-201ENST00000424573 156 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AL669831.1-202ENST00000428504 417 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms