Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 Y_RNA.162-201ENST00000363683 102 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 Y_RNA.485-201ENST00000384395 102 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 MIR606-201ENST00000384851 96 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 WARS2P1-201ENST00000429678 537 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC112492.4-201ENST00000456549 352 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 Y_RNA.721-201ENST00000517207 102 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC090517.1-201ENST00000569307 266 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 MIR5188-201ENST00000583467 113 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC016727.2-201ENST00000603988 621 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC005296.1-201ENST00000616145 209 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM43BA6NCK2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 BX322639.1-202ENST00000423987 2213 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 SNORA25.6-201ENST00000364121 118 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 RNU6-879P-201ENST00000364328 108 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 RNU6-1160P-201ENST00000384546 104 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 SNORA12-201ENST00000391162 147 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AL356320.1-201ENST00000429616 163 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AL445305.1-201ENST00000432577 575 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AL161788.1-201ENST00000441805 169 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AC107032.1-201ENST00000485945 480 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AC132942.1-201ENST00000486753 483 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 UBL5P4-201ENST00000562584 236 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 AC090616.3-201ENST00000582184 217 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 RPS29P30-201ENST00000600975 111 ntBASIC2.79□□□□□ -1.96
TRIM43BA6NCK2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 SNORD114-1-201ENST00000362705 72 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 SNORD14.1-201ENST00000365609 90 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 RNU6-245P-201ENST00000384020 107 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 MIR10B-201ENST00000385011 110 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 AL079342.1-201ENST00000401460 267 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 MIR1294-201ENST00000408503 142 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 RNU6-101P-201ENST00000410323 104 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 EIF1P2-201ENST00000428233 350 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 AC027124.2-201ENST00000428249 105 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 AC096638.1-201ENST00000444678 216 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 U8.22-201ENST00000459141 133 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 AL442163.3-201ENST00000554110 156 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 MIR4680-201ENST00000580906 66 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 AC005562.2-201ENST00000618264 111 ntBASIC2.78□□□□□ -1.96
TRIM43BA6NCK2 RNU6-873P-201ENST00000363833 107 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 SNORD32B-201ENST00000364460 84 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 Y_RNA.389-201ENST00000383924 113 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 MIR549A-201ENST00000385268 96 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 CBX3P6-201ENST00000430257 527 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 MTCO3P8-201ENST00000453691 755 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AC093852.1-201ENST00000503587 266 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AC093023.1-201ENST00000547375 507 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AL360085.1-201ENST00000604713 532 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 RPL17P51-201ENST00000605218 238 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
TRIM43BA6NCK2 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 SNORA18.2-201ENST00000383865 132 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 SNORA51.11-201ENST00000384442 131 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 RNA5SP247-201ENST00000411181 105 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 AC040926.1-201ENST00000530195 238 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 AC124312.5-201ENST00000604451 268 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 PART1_1.1-201ENST00000611761 217 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.76□□□□□ -1.97
TRIM43BA6NCK2 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 Y_RNA.27-201ENST00000362540 103 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 RNU6-944P-201ENST00000364023 107 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 Y_RNA.455-201ENST00000384230 98 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 Y_RNA.527-201ENST00000384573 102 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM43BA6NCK2 AC234781.5-201ENST00000508429 271 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms