Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RN7SKP164-201ENST00000516138 266 ntBASIC-0.69□□□□□ -2.52
AP4S1Q9Y587 RNU11-2P-201ENST00000516898 142 ntBASIC-0.69□□□□□ -2.52
AP4S1Q9Y587 MIR5697-201ENST00000578045 78 ntBASIC-0.69□□□□□ -2.52
AP4S1Q9Y587 AL022154.1-201ENST00000604698 785 ntBASIC-0.69□□□□□ -2.52
AP4S1Q9Y587 MTND4P4-201ENST00000439033 1366 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 SNORD14C-201ENST00000365382 88 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 RNU6-744P-201ENST00000365557 107 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 MIR1305-201ENST00000408300 86 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC245047.3-201ENST00000429428 127 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC005002.2-201ENST00000438228 269 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC104563.1-201ENST00000476147 376 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC114811.1-201ENST00000507207 168 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC112206.3-201ENST00000514578 389 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 RNU4-49P-201ENST00000516080 140 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC005332.6-201ENST00000613178 446 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 uc_338.6-201ENST00000613544 171 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 AC006927.4-201ENST00000639187 543 ntBASIC-0.7□□□□□ -2.52
AP4S1Q9Y587 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 RNU6-545P-201ENST00000362681 104 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 AC005534.2-201ENST00000431047 433 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 RNU6-583P-201ENST00000516012 92 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 RNA5SP268-201ENST00000516828 124 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 IGLVI-20-201ENST00000519296 130 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 MIR4645-201ENST00000583158 77 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 uc_338.16-201ENST00000621804 95 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 AC093875.1-201ENST00000623688 504 ntBASIC-0.71□□□□□ -2.52
AP4S1Q9Y587 RNU6-654P-201ENST00000364373 107 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 MIR329-2-201ENST00000385029 84 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 MIR196A2-201ENST00000385189 110 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 MRPL42P3-201ENST00000401492 326 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 AC006366.1-201ENST00000422002 759 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 AP000870.1-201ENST00000472927 406 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 TRBVB-201ENST00000477100 408 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 AC107401.1-201ENST00000503426 685 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 SUMO2P5-201ENST00000506790 245 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 7SK.7-201ENST00000603504 247 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 AC011921.3-201ENST00000605540 361 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 RMST_7.1-201ENST00000621935 268 ntBASIC-0.72□□□□□ -2.52
AP4S1Q9Y587 RNU6-78P-201ENST00000362897 107 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 CDK8P2-201ENST00000415020 547 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 CALM2P4-201ENST00000430810 426 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 RNU7-129P-201ENST00000516128 62 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 MIR15A-201ENST00000607334 83 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 MIR8064-201ENST00000612863 90 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 AL109933.3-201ENST00000619095 188 ntBASIC-0.73□□□□□ -2.53
AP4S1Q9Y587 SNORD114-31-201ENST00000363219 75 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 SNORD114-28-201ENST00000363610 72 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC083799.1-201ENST00000366451 910 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 RNU6-424P-201ENST00000384367 105 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 RNU6-925P-201ENST00000384629 104 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 RNU6-269P-201ENST00000391077 97 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 RNA5SP300-201ENST00000391197 107 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 U8.16-201ENST00000391279 133 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 HSFY7P-201ENST00000432672 318 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 HSFY8P-201ENST00000437934 318 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC007000.2-201ENST00000442564 487 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AL139824.2-201ENST00000458731 1095 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC079382.1-201ENST00000493346 557 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 AC124016.2-201ENST00000610058 665 ntBASIC-0.74□□□□□ -2.53
AP4S1Q9Y587 SNORA36.1-201ENST00000363424 132 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 SNORA32.3-201ENST00000384772 121 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AC069271.1-201ENST00000445577 156 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AC005042.3-201ENST00000453230 174 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AC119751.4-201ENST00000507498 357 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AC008752.3-201ENST00000588113 712 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AL162424.1-201ENST00000602325 221 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 AL359075.3-201ENST00000613288 217 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 MIR548AZ-201ENST00000616567 95 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 FTX_2.1-201ENST00000618816 94 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 uc_338.36-201ENST00000622331 158 ntBASIC-0.75□□□□□ -2.53
AP4S1Q9Y587 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.76□□□□□ -2.53
AP4S1Q9Y587 RNU6-384P-201ENST00000364900 104 ntBASIC-0.76□□□□□ -2.53
AP4S1Q9Y587 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms