Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 MTND1P35-201ENST00000526739 508 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 MIR4648-201ENST00000580107 72 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AL162413.1-201ENST00000603198 110 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 MIR6798-201ENST00000612887 67 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC008873.1-201ENST00000625051 138 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 AC100821.1-201ENST00000523153 2479 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
KCNIP3Q9Y2W7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 SNORA72.2-201ENST00000365028 127 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-780P-201ENST00000391030 104 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-908P-201ENST00000410160 94 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 NDUFA5P4-201ENST00000436704 385 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 RPL23AP75-201ENST00000491601 451 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 AC016957.1-201ENST00000534895 309 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 DISC2.1-201ENST00000612827 205 ntBASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.24□□□□□ -2.21
KCNIP3Q9Y2W7 U8.10-201ENST00000384260 133 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 SNORD116-2-201ENST00000384274 95 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 SNORD116-6-201ENST00000384711 96 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AL358453.1-201ENST00000422522 250 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC079354.2-201ENST00000453523 154 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 RNU7-187P-201ENST00000458985 68 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 snoU13.27-201ENST00000459278 104 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC008549.1-201ENST00000512900 643 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-1281P-201ENST00000516223 105 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 MIR4255-201ENST00000579351 72 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 MIR4435-1-201ENST00000582552 80 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC010525.2-201ENST00000590920 195 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 AC092954.2-201ENST00000609103 430 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 MIR8063-201ENST00000621930 81 ntBASIC1.23□□□□□ -2.21
KCNIP3Q9Y2W7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 SNORD50.1-201ENST00000362987 71 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-534P-201ENST00000364877 106 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 MIR515-2-201ENST00000384883 83 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 MIR515-1-201ENST00000384884 83 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 MIR194-1-201ENST00000384892 85 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 MIR320B2-201ENST00000408479 138 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 RNU4-26P-201ENST00000410270 107 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AC027119.1-201ENST00000440877 241 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 TRBVA-201ENST00000498804 316 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 RNU6-344P-201ENST00000516635 111 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AC015688.6-201ENST00000577737 104 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
KCNIP3Q9Y2W7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNORA33-201ENST00000363664 130 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNORD115-8-201ENST00000363856 82 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNORD115-38-201ENST00000365037 82 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 Y_RNA.372-201ENST00000365599 102 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 RNU6-483P-201ENST00000384088 108 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 MIR487A-201ENST00000385009 80 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNRPGP13-201ENST00000442212 177 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 MTND1P1-201ENST00000445453 368 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 RNU7-66P-201ENST00000459469 62 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 HMGN2P26-201ENST00000463169 339 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 Y_RNA.704-201ENST00000516851 102 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 RNA5SP54-201ENST00000516951 92 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 AK6P1-201ENST00000540219 478 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 ZNF204P-201ENST00000416749 2397 ntBASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
KCNIP3Q9Y2W7 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms