Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MTND5P16-201ENST00000460269 1703 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC068700.1-201ENST00000565862 3754 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-108P-201ENST00000365558 107 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-163P-201ENST00000384396 106 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 MIR128-1-201ENST00000384921 82 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 MIR1-2-201ENST00000384961 85 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 SNORD89-201ENST00000390981 114 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 U8.16-201ENST00000391279 133 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC098592.1-201ENST00000419352 333 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC092423.1-201ENST00000430165 186 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RPS6P15-201ENST00000431996 751 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RPL23AP50-201ENST00000434149 455 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 GPR143P-201ENST00000434155 205 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 USP9YP29-201ENST00000445112 563 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 MTCO2P7-201ENST00000446518 666 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC074290.1-201ENST00000448883 135 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 TPT1P7-201ENST00000458300 517 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 SCARNA18-201ENST00000459004 134 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC119751.5-201ENST00000514077 770 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA68.3-201ENST00000515906 83 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RNU7-99P-201ENST00000516271 62 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC022868.1-201ENST00000517767 391 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 MTND1P15-201ENST00000579262 949 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC131055.1-201ENST00000584626 316 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 AC004223.2-201ENST00000590309 544 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 SEPT14P19-203ENST00000633205 211 ntBASIC0.19□□□□□ -2.38
CDC42SE1Q9NRR8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA80A-201ENST00000363922 136 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AL031577.2-201ENST00000404133 280 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1186P-201ENST00000410429 97 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC108667.1-201ENST00000428618 249 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 STAG3L5P-204ENST00000443759 179 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RPS29P15-201ENST00000458329 171 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 OR9P1P-201ENST00000496431 281 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 FABP5P5-201ENST00000515537 406 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-344P-201ENST00000516635 111 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-612P-201ENST00000516909 102 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 MTND2P32-201ENST00000521584 1038 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 FRG2DP-202ENST00000566967 323 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC025627.3-201ENST00000582078 182 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 MIR3192-201ENST00000584920 77 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 Z83818.1-201ENST00000603584 150 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC025449.1-201ENST00000603896 529 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AL033523.1-201ENST00000605153 153 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-85P-201ENST00000605989 107 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 uc_338.11-201ENST00000619132 160 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 AL078596.1-201ENST00000624856 447 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 SCARNA4-201ENST00000629045 128 ntBASIC0.18□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-227P-201ENST00000362865 103 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1097P-201ENST00000363586 107 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1286P-201ENST00000383871 107 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA50A-201ENST00000384225 134 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 MIR513B-201ENST00000385136 84 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA3.2-201ENST00000408221 125 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC114737.2-201ENST00000421583 173 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 MRPS18CP6-201ENST00000423587 223 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 MTCYBP10-201ENST00000424905 650 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AL162725.1-201ENST00000435405 301 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC009961.2-201ENST00000435771 251 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC093850.1-201ENST00000454121 251 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 GMFBP1-201ENST00000467831 427 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA67.7-201ENST00000516664 135 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-430P-201ENST00000517078 107 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AK6P2-201ENST00000549020 471 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 MIR1254-2-201ENST00000579553 63 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 MIR4429-201ENST00000580105 73 ntBASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.17□□□□□ -2.38
CDC42SE1Q9NRR8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 MIRLET7D-201ENST00000362263 87 ntBASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 SNORD114-1-201ENST00000362705 72 ntBASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 RNY1P8-201ENST00000383970 114 ntBASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 MIR508-201ENST00000384857 115 ntBASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 SNORD73A-201ENST00000386062 65 ntBASIC0.16□□□□□ -2.38
CDC42SE1Q9NRR8 Y_RNA.598-201ENST00000410480 95 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms