Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR4742-201ENST00000581069 85 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 AC119751.7-201ENST00000600494 245 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 AL121757.2-201ENST00000611223 313 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 RMST_3.1-201ENST00000611651 109 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 AC078883.4-201ENST00000623218 367 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 OR5AK4P-201ENST00000635912 903 ntBASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
SLIRPQ9GZT3 SNORA33-201ENST00000363664 130 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNA5SP190-201ENST00000365222 118 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 SNORA4.2-201ENST00000365313 147 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU4-20P-201ENST00000365601 151 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-784P-201ENST00000384330 106 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-331P-201ENST00000384724 107 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-325P-201ENST00000411132 105 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 TIMM9P3-201ENST00000428659 274 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 SNORA19.2-201ENST00000516013 114 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 MIR4513-201ENST00000581077 86 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 AC100830.2-201ENST00000581636 240 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 SNRPGP20-201ENST00000604477 205 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 MIR8076-201ENST00000611401 83 ntBASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.01□□□□□ -2.25
SLIRPQ9GZT3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1□□□□□ -2.25
SLIRPQ9GZT3 Y_RNA.77-201ENST00000362962 107 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 RNU6-1322P-201ENST00000364309 107 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 Y_RNA.287-201ENST00000364853 94 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 SNORA67.2-201ENST00000384300 149 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 MIR549A-201ENST00000385268 96 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 SNRPEP10-201ENST00000420249 274 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1□□□□□ -2.25
SLIRPQ9GZT3 RNU1-41P-201ENST00000516161 162 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 RNU1-48P-201ENST00000516400 162 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC024995.1-201ENST00000523014 93 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1□□□□□ -2.25
SLIRPQ9GZT3 AL442163.3-201ENST00000554110 156 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 MIR4709-201ENST00000577272 72 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC092807.2-201ENST00000609367 243 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC137590.2-201ENST00000619709 240 ntBASIC1□□□□□ -2.25
SLIRPQ9GZT3 AC121333.1-201ENST00000567488 2709 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 SNORA69-201ENST00000383895 132 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 RNU6-214P-201ENST00000384130 107 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MIR514A2-201ENST00000385131 88 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MIR514A3-201ENST00000385132 88 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 EIF4E2P1-201ENST00000393781 255 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 SNX2P2-201ENST00000424553 323 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MTCO1P20-201ENST00000425366 358 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MRPS10P2-201ENST00000431226 381 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MTCO2P16-201ENST00000436962 677 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC074290.1-201ENST00000448883 135 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 RNU7-57P-201ENST00000459540 60 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MTCO1P29-201ENST00000496868 288 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC010424.1-201ENST00000506336 297 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC116337.1-201ENST00000509680 687 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC008873.1-201ENST00000625051 138 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 SCARNA4-201ENST00000629045 128 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 MIR3974-201ENST00000637126 96 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 ELL2P3-201ENST00000457883 1602 ntBASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.99□□□□□ -2.25
SLIRPQ9GZT3 Y_RNA.359-201ENST00000365498 102 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 Y_RNA.481-201ENST00000384373 102 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 RNU6-417P-201ENST00000384712 107 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 SNORA67.5-201ENST00000391036 107 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 AL513124.1-201ENST00000450410 614 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 MTND3P16-201ENST00000452205 344 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 TPT1P7-201ENST00000458300 517 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 HMGN1P12-201ENST00000499125 195 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 RNU6-344P-201ENST00000516635 111 ntBASIC0.98□□□□□ -2.25
SLIRPQ9GZT3 RNU6-835P-201ENST00000516974 104 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms