Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 U6atac.1-201ENST00000616025 117 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC099654.5-201ENST00000636479 350 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
LINC00477Q96M19 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC00477Q96M19 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC00477Q96M19 CBX3P1-201ENST00000325243 554 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 Y_RNA.88-201ENST00000363029 99 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 RNU6-968P-201ENST00000384076 107 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 RNU6-790P-201ENST00000384479 105 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 MIR29B2-201ENST00000385055 81 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 RNU6-1093P-201ENST00000391194 107 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 RNA5SP118-201ENST00000410385 109 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 MTND3P8-201ENST00000412909 339 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 SNRPEP8-201ENST00000442866 260 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 PCMTD1P1-201ENST00000455560 355 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC087477.1-201ENST00000465747 340 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 RPL7P42-201ENST00000481005 679 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC022447.4-201ENST00000504053 364 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 RPL23AP94-201ENST00000512518 302 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 UBL5P4-201ENST00000562584 236 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 MIR3136-201ENST00000583498 78 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 POLR3GP2-201ENST00000588366 668 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC019193.3-201ENST00000609144 554 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 AL590240.4-201ENST00000616908 390 ntBASIC1.28□□□□□ -2.2
LINC00477Q96M19 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
LINC00477Q96M19 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
LINC00477Q96M19 AL356292.1-201ENST00000283110 373 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 RNU6-545P-201ENST00000362681 104 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 RNU6-611P-201ENST00000384276 104 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 MIR583-201ENST00000384846 75 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 RNU6-174P-201ENST00000410406 106 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 RNA5SP504-201ENST00000410676 117 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC138393.2-201ENST00000414742 246 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 HMGN2P3-201ENST00000433603 273 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 HMGN2P5-201ENST00000436882 273 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC245102.2-201ENST00000448956 180 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 U8.21-201ENST00000459536 136 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 RNU6-507P-201ENST00000516045 100 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AP005660.1-201ENST00000522972 293 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC115990.1-201ENST00000526957 301 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AK6P2-201ENST00000549020 471 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC00477Q96M19 CYP4A27P-201ENST00000567218 190 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC090517.1-201ENST00000569307 266 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 MIR3923-201ENST00000579521 83 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 FGF7P1-201ENST00000582820 288 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC011494.1-201ENST00000596454 237 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC124303.1-201ENST00000605703 360 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 RMST_6.1-201ENST00000611980 203 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 AC005520.5-201ENST00000613926 164 ntBASIC1.27□□□□□ -2.21
LINC00477Q96M19 MIR126-201ENST00000362291 85 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNU6-222P-201ENST00000362438 107 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNU6-845P-201ENST00000362578 103 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNU6-26P-201ENST00000383985 107 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 Y_RNA.474-201ENST00000384341 102 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNU6-331P-201ENST00000384724 107 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 MIR9-3-201ENST00000385084 90 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 MIR30A-201ENST00000385092 71 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LINC00477Q96M19 Y_RNA.594-201ENST00000410373 140 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNA5SP494-201ENST00000410653 129 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC243428.1-201ENST00000421099 264 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 HMGB1P18-201ENST00000438801 619 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 MTND3P10-201ENST00000450967 341 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC116353.2-201ENST00000505332 712 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC079140.5-201ENST00000507882 310 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 RNVU1-2-201ENST00000516326 135 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 SNORA20.3-201ENST00000516880 132 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 EIF4A1P12-201ENST00000551910 141 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 MIR5696-201ENST00000578474 85 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC011712.1-201ENST00000588959 234 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC116312.1-201ENST00000606841 314 ntBASIC1.26□□□□□ -2.21
LINC00477Q96M19 AC005014.2-201ENST00000607795 599 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms