Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 AL049873.1-201ENST00000480540 376 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 RPL30P10-201ENST00000488148 337 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 AC005786.1-201ENST00000588553 154 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 AC011712.1-201ENST00000588959 234 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.15-201ENST00000611544 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.16-201ENST00000613119 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.12-201ENST00000613778 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.20-201ENST00000613956 192 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.9-201ENST00000615427 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.11-201ENST00000616345 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.2-201ENST00000616535 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.3-201ENST00000617785 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.19-201ENST00000618602 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 RNU2-1-201ENST00000618664 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.6-201ENST00000619225 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.5-201ENST00000619465 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 U2.10-201ENST00000620268 191 ntBASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC197Q8NCU1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 ZNF204P-201ENST00000416749 2397 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 AL356432.1-201ENST00000405809 419 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 RN7SKP32-201ENST00000410167 303 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 RPL23AP6-201ENST00000446637 472 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 RNA5SP54-201ENST00000516951 92 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 AC027288.2-201ENST00000553028 243 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 AC018462.2-201ENST00000605375 395 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 MIR219B-201ENST00000637023 88 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.7□□□□□ -2.14
CCDC197Q8NCU1 ZNF299P-201ENST00000406845 1804 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RNU6-17P-201ENST00000384245 107 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 SNORA67.2-201ENST00000384300 149 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RNU6-18P-201ENST00000384527 107 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 SNORA64-201ENST00000384674 134 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 MIR153-2-201ENST00000385225 87 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 MIR548F5-201ENST00000408421 86 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 Z92545.1-201ENST00000411782 234 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AL139415.2-201ENST00000431968 163 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 HMGN2P9-201ENST00000476875 229 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC067942.3-201ENST00000512025 362 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC046134.1-201ENST00000514454 666 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RNU6-856P-201ENST00000516959 98 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RNU6-58P-201ENST00000517143 103 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AP002770.2-201ENST00000543613 532 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AC011494.1-201ENST00000596454 237 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 AL359697.1-201ENST00000624879 587 ntBASIC1.69□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-595P-201ENST00000363944 107 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-593P-201ENST00000364716 112 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-245P-201ENST00000384020 107 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-418P-201ENST00000384035 107 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AL079342.1-201ENST00000401460 267 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 FGF7P8-201ENST00000402994 292 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNA5SP100-201ENST00000410903 110 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNA5SP59-201ENST00000410922 110 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RPS3AP52-201ENST00000435639 297 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AC026782.1-201ENST00000512952 449 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-344P-201ENST00000516635 111 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 MIR4273-201ENST00000582824 84 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 MIR4753-201ENST00000585119 83 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AC005858.4-201ENST00000623191 700 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 AC008873.1-201ENST00000625051 138 ntBASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC197Q8NCU1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC197Q8NCU1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.67□□□□□ -2.14
CCDC197Q8NCU1 RNU6-137P-201ENST00000363680 108 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms