Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AL133217.1-201ENST00000450980 425 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AC113410.1-201ENST00000505029 247 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 MIR5190-201ENST00000581537 80 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 MIR3118-1-201ENST00000581787 76 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 MIR4636-201ENST00000582271 80 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AC064807.4-201ENST00000607201 407 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AL359697.1-201ENST00000624879 587 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 SNORA33-201ENST00000363664 130 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 SNORD116.1-201ENST00000365628 92 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 Y_RNA.471-201ENST00000384312 102 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 SNORA24.1-201ENST00000384401 135 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 Y_RNA.504-201ENST00000384481 104 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 RNU6-417P-201ENST00000384712 107 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AL035398.1-201ENST00000430869 322 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AC104982.1-201ENST00000478775 574 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AC008521.1-201ENST00000587471 187 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 Z98751.3-201ENST00000604447 521 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AL139022.2-201ENST00000606934 443 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AL021368.1-201ENST00000607490 540 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AC009509.4-201ENST00000619202 509 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AL603839.4-201ENST00000624658 1005 ntBASIC0.22□□□□□ -2.37
RFX7Q2KHR2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.22□□□□□ -2.37
RFX7Q2KHR2 RNU6-562P-201ENST00000362731 107 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 Y_RNA.110-201ENST00000363220 99 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 Y_RNA.324-201ENST00000365165 102 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AL034345.1-201ENST00000407768 123 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU2-3P-201ENST00000410144 191 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU2-72P-201ENST00000411175 163 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AL133396.1-201ENST00000432048 687 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 MTND3P1-201ENST00000441336 220 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU7-21P-201ENST00000459430 62 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.21□□□□□ -2.38
RFX7Q2KHR2 CYCTP-201ENST00000504253 315 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 SNORA19.3-201ENST00000516165 130 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU1-142P-201ENST00000516682 145 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC010376.1-201ENST00000522101 334 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC025627.3-201ENST00000582078 182 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC073539.2-201ENST00000597113 165 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AL357312.1-201ENST00000603879 298 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC008250.2-201ENST00000615261 205 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AL136221.1-201ENST00000621449 509 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 AC006001.4-201ENST00000622243 395 ntBASIC0.21□□□□□ -2.38
RFX7Q2KHR2 RNU6-336P-201ENST00000364891 107 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 SNORA26.3-201ENST00000391119 136 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 RNU6-1093P-201ENST00000391194 107 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 RNA5SP467-201ENST00000391274 118 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AL451046.2-201ENST00000403074 277 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AL355796.1-201ENST00000406706 323 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 HSFY7P-201ENST00000432672 318 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 HSFY8P-201ENST00000437934 318 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC233266.1-201ENST00000454518 96 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 RPS26P48-201ENST00000491713 339 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC016550.1-201ENST00000505348 785 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 HMGB1P29-201ENST00000505659 499 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC016256.1-201ENST00000547971 354 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC009994.1-201ENST00000606889 253 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC097065.2-201ENST00000608159 533 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC242852.1-201ENST00000612151 96 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AL513423.1-201ENST00000621695 132 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 AC244015.1-201ENST00000622301 99 ntBASIC0.2□□□□□ -2.38
RFX7Q2KHR2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.2□□□□□ -2.38
RFX7Q2KHR2 SNORD32A-201ENST00000364805 84 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 SNORD116-13-201ENST00000384408 92 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 SNORD99-201ENST00000408612 74 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-387P-201ENST00000411331 105 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MTATP6P20-201ENST00000414147 562 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 CALM2P2-201ENST00000428512 440 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RPS24P1-201ENST00000438550 371 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 NFU1P2-201ENST00000448700 469 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC074290.1-201ENST00000448883 135 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC016717.1-201ENST00000448918 286 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC079382.1-201ENST00000493346 557 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC022493.2-201ENST00000506122 481 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 SUB1P2-201ENST00000556401 297 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AL391840.1-201ENST00000571144 367 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms