Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGXB3Q12766 AC090517.2-201ENST00000614966 680 ntBASIC-0.33□□□□□ -2.46
HMGXB3Q12766 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.33□□□□□ -2.46
HMGXB3Q12766 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.33□□□□□ -2.46
HMGXB3Q12766 RNU6-199P-201ENST00000362954 107 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SNORA36.1-201ENST00000363424 132 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 RNA5SP323-201ENST00000391094 133 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SNORA40.8-201ENST00000411034 126 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SNORD71-201ENST00000411292 86 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SEPT7P5-201ENST00000434048 306 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SEPT7P4-201ENST00000437076 306 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 STAG3L5P-204ENST00000443759 179 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL133217.1-201ENST00000450980 425 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 MRPL42P4-201ENST00000453267 443 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGXB3Q12766 U8.21-201ENST00000459536 136 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL606834.3-201ENST00000602615 496 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 AL391903.3-201ENST00000612158 163 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 SEPT14P17-201ENST00000617978 177 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.34□□□□□ -2.46
HMGXB3Q12766 RNY4P6-201ENST00000363667 96 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 RNY4P16-201ENST00000364768 94 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 RNU6-142P-201ENST00000384019 107 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 RNU6-278P-201ENST00000390945 109 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
HMGXB3Q12766 AL603865.2-201ENST00000401679 213 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 AL079342.2-201ENST00000403367 482 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.35□□□□□ -2.47
HMGXB3Q12766 SNORA43.2-201ENST00000516652 128 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
HMGXB3Q12766 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.35□□□□□ -2.47
HMGXB3Q12766 MIR4743-201ENST00000584576 69 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 AL034555.1-201ENST00000604816 211 ntBASIC-0.35□□□□□ -2.47
HMGXB3Q12766 MIR18A-201ENST00000362310 71 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 MIR643-201ENST00000385267 97 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 RNA5SP109-201ENST00000391010 116 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 AL139396.1-201ENST00000421137 167 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.36□□□□□ -2.47
HMGXB3Q12766 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 MTND1P31-201ENST00000449206 961 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 RNU6-583P-201ENST00000516012 92 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 AC022868.1-201ENST00000517767 391 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 AC024995.1-201ENST00000523014 93 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.36□□□□□ -2.47
HMGXB3Q12766 AC021231.3-201ENST00000558497 370 ntBASIC-0.36□□□□□ -2.47
HMGXB3Q12766 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.36□□□□□ -2.47
HMGXB3Q12766 MIR412-201ENST00000362142 91 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 SNORD114-5-201ENST00000362928 70 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.37□□□□□ -2.47
HMGXB3Q12766 MIR610-201ENST00000385139 96 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 SNORD111-201ENST00000408139 94 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AC074133.1-201ENST00000515696 183 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AC023632.1-201ENST00000518463 375 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AF235103.2-201ENST00000525753 346 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AC112187.2-201ENST00000604345 283 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AC010975.3-201ENST00000618727 978 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 AC015726.2-201ENST00000620112 122 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 CDR1-202ENST00000625883 1485 ntBASIC-0.37□□□□□ -2.47
HMGXB3Q12766 SNORA2.2-201ENST00000365473 135 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR544A-201ENST00000384855 91 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR145-201ENST00000384967 88 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR660-201ENST00000385235 97 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RN7SKP266-201ENST00000410232 287 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AC093019.1-201ENST00000443135 252 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 SUMO2P5-201ENST00000506790 245 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RBBP4P6-201ENST00000508098 202 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 SNORA31.10-201ENST00000516482 106 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-64P-201ENST00000517119 105 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MTND5P42-201ENST00000637720 498 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNA5SP128-201ENST00000365305 116 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR106A-201ENST00000384870 81 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR1827-201ENST00000408549 66 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-994P-201ENST00000410507 111 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MTND4LP14-201ENST00000429447 288 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNU6-914P-201ENST00000516749 109 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AP003716.2-201ENST00000528260 108 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 ZNF971P-201ENST00000562068 1249 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms