Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTCO3P8-201ENST00000453691 755 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.33□□□□□ -2.2
CBX1P83916 TPT1P7-201ENST00000458300 517 ntBASIC1.33□□□□□ -2.2
CBX1P83916 snoU13.27-201ENST00000459278 104 ntBASIC1.33□□□□□ -2.2
CBX1P83916 RNU6-1208P-201ENST00000459588 107 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AC092436.3-201ENST00000511788 257 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.33□□□□□ -2.2
CBX1P83916 AP003033.1-201ENST00000527244 415 ntBASIC1.33□□□□□ -2.2
CBX1P83916 SUB1P3-201ENST00000564581 315 ntBASIC1.33□□□□□ -2.2
CBX1P83916 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.33□□□□□ -2.2
CBX1P83916 OR5AK4P-201ENST00000635912 903 ntBASIC1.33□□□□□ -2.2
CBX1P83916 SNORA72.2-201ENST00000365028 127 ntBASIC1.32□□□□□ -2.2
CBX1P83916 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
CBX1P83916 MIR549A-201ENST00000385268 96 ntBASIC1.32□□□□□ -2.2
CBX1P83916 DEFB108C-201ENST00000400154 252 ntBASIC1.32□□□□□ -2.2
CBX1P83916 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
CBX1P83916 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
CBX1P83916 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.32□□□□□ -2.2
CBX1P83916 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
CBX1P83916 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.32□□□□□ -2.2
CBX1P83916 AC074290.1-201ENST00000448883 135 ntBASIC1.32□□□□□ -2.2
CBX1P83916 OR2AQ1P-201ENST00000451972 200 ntBASIC1.32□□□□□ -2.2
CBX1P83916 AF186996.7-201ENST00000492781 209 ntBASIC1.32□□□□□ -2.2
CBX1P83916 AC108210.2-201ENST00000503681 201 ntBASIC1.32□□□□□ -2.2
CBX1P83916 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.32□□□□□ -2.2
CBX1P83916 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
CBX1P83916 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.32□□□□□ -2.2
CBX1P83916 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.32□□□□□ -2.2
CBX1P83916 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.32□□□□□ -2.2
CBX1P83916 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.32□□□□□ -2.2
CBX1P83916 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
CBX1P83916 SNRPGP20-201ENST00000604477 205 ntBASIC1.32□□□□□ -2.2
CBX1P83916 RN7SKP299-201ENST00000606679 301 ntBASIC1.32□□□□□ -2.2
CBX1P83916 MIR8076-201ENST00000611401 83 ntBASIC1.32□□□□□ -2.2
CBX1P83916 MTND4P5-201ENST00000435821 1374 ntBASIC1.32□□□□□ -2.2
CBX1P83916 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CBX1P83916 snoU2-30.2-201ENST00000362805 70 ntBASIC1.31□□□□□ -2.2
CBX1P83916 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
CBX1P83916 RNU6-1042P-201ENST00000384204 107 ntBASIC1.31□□□□□ -2.2
CBX1P83916 RNU6-933P-201ENST00000384424 107 ntBASIC1.31□□□□□ -2.2
CBX1P83916 RNU6-331P-201ENST00000384724 107 ntBASIC1.31□□□□□ -2.2
CBX1P83916 MIR521-1-201ENST00000384902 87 ntBASIC1.31□□□□□ -2.2
CBX1P83916 EIF4E2P1-201ENST00000393781 255 ntBASIC1.31□□□□□ -2.2
CBX1P83916 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
CBX1P83916 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.31□□□□□ -2.2
CBX1P83916 AL135790.2-201ENST00000437701 267 ntBASIC1.31□□□□□ -2.2
CBX1P83916 AC073910.1-201ENST00000445047 438 ntBASIC1.31□□□□□ -2.2
CBX1P83916 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.31□□□□□ -2.2
CBX1P83916 MTND3P16-201ENST00000452205 344 ntBASIC1.31□□□□□ -2.2
CBX1P83916 AC007215.1-201ENST00000464893 276 ntBASIC1.31□□□□□ -2.2
CBX1P83916 MTCO1P29-201ENST00000496868 288 ntBASIC1.31□□□□□ -2.2
CBX1P83916 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.31□□□□□ -2.2
CBX1P83916 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
CBX1P83916 AC104984.5-201ENST00000586878 94 ntBASIC1.31□□□□□ -2.2
CBX1P83916 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.31□□□□□ -2.2
CBX1P83916 MIR6715A-201ENST00000615929 79 ntBASIC1.31□□□□□ -2.2
CBX1P83916 MTND5P35-201ENST00000557537 1720 ntBASIC1.31□□□□□ -2.2
CBX1P83916 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CBX1P83916 RNU6-1119P-201ENST00000384349 108 ntBASIC1.3□□□□□ -2.2
CBX1P83916 MIR586-201ENST00000385035 97 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AF228730.1-201ENST00000397972 663 ntBASIC1.3□□□□□ -2.2
CBX1P83916 MIR320B2-201ENST00000408479 138 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AC004866.1-201ENST00000411748 78 ntBASIC1.3□□□□□ -2.2
CBX1P83916 COX6CP10-201ENST00000416832 224 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AL591806.2-201ENST00000433122 173 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.3□□□□□ -2.2
CBX1P83916 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.3□□□□□ -2.2
CBX1P83916 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.3□□□□□ -2.2
CBX1P83916 RNU6-1146P-201ENST00000516282 102 ntBASIC1.3□□□□□ -2.2
CBX1P83916 RNU6-1332P-201ENST00000516666 104 ntBASIC1.3□□□□□ -2.2
CBX1P83916 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CBX1P83916 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.3□□□□□ -2.2
CBX1P83916 AC005668.1-201ENST00000571142 476 ntBASIC1.3□□□□□ -2.2
CBX1P83916 CPDP1-201ENST00000579660 283 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AC100830.2-201ENST00000581636 240 ntBASIC1.3□□□□□ -2.2
CBX1P83916 MIR3611-201ENST00000584484 83 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
CBX1P83916 AC137590.2-201ENST00000619709 240 ntBASIC1.3□□□□□ -2.2
CBX1P83916 MIR6863-201ENST00000636112 90 ntBASIC1.3□□□□□ -2.2
CBX1P83916 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
CBX1P83916 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
CBX1P83916 Y_RNA.167-201ENST00000363735 109 ntBASIC1.29□□□□□ -2.2
CBX1P83916 RNU6-1305P-201ENST00000364353 104 ntBASIC1.29□□□□□ -2.2
CBX1P83916 RNU6-784P-201ENST00000384330 106 ntBASIC1.29□□□□□ -2.2
CBX1P83916 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
CBX1P83916 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
CBX1P83916 MIR514A2-201ENST00000385131 88 ntBASIC1.29□□□□□ -2.2
CBX1P83916 MIR514A3-201ENST00000385132 88 ntBASIC1.29□□□□□ -2.2
CBX1P83916 SNRPEP10-201ENST00000420249 274 ntBASIC1.29□□□□□ -2.2
CBX1P83916 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
CBX1P83916 SNORD13-201ENST00000459299 104 ntBASIC1.29□□□□□ -2.2
CBX1P83916 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.29□□□□□ -2.2
CBX1P83916 RNU6-835P-201ENST00000516974 104 ntBASIC1.29□□□□□ -2.2
CBX1P83916 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
CBX1P83916 MTND1P35-201ENST00000526739 508 ntBASIC1.29□□□□□ -2.2
CBX1P83916 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.29□□□□□ -2.2
CBX1P83916 AC146944.4-201ENST00000602697 718 ntBASIC1.29□□□□□ -2.2
CBX1P83916 AC068792.1-201ENST00000621354 417 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms