Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL109918.3-201ENST00000603072 338 ntBASIC2.58□□□□□ -2
RHBDL3P58872 AC018462.2-201ENST00000605375 395 ntBASIC2.58□□□□□ -2
RHBDL3P58872 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.58□□□□□ -2
RHBDL3P58872 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.58□□□□□ -2
RHBDL3P58872 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.58□□□□□ -2
RHBDL3P58872 RNU6-845P-201ENST00000362578 103 ntBASIC2.57□□□□□ -2
RHBDL3P58872 RNU6-280P-201ENST00000364145 104 ntBASIC2.57□□□□□ -2
RHBDL3P58872 Y_RNA.319-201ENST00000365138 92 ntBASIC2.57□□□□□ -2
RHBDL3P58872 Y_RNA.482-201ENST00000384377 111 ntBASIC2.57□□□□□ -2
RHBDL3P58872 RNA5SP212-201ENST00000391223 107 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AC243428.1-201ENST00000421099 264 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AC096920.1-201ENST00000423991 241 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AC139712.2-201ENST00000424302 339 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AL357134.1-201ENST00000445848 426 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.57□□□□□ -2
RHBDL3P58872 RPL23AP3-201ENST00000453844 468 ntBASIC2.57□□□□□ -2
RHBDL3P58872 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.57□□□□□ -2
RHBDL3P58872 RNU6-307P-201ENST00000516743 106 ntBASIC2.57□□□□□ -2
RHBDL3P58872 RNU7-30P-201ENST00000516835 62 ntBASIC2.57□□□□□ -2
RHBDL3P58872 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AC134698.4-201ENST00000523451 826 ntBASIC2.57□□□□□ -2
RHBDL3P58872 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.57□□□□□ -2
RHBDL3P58872 MIR3169-201ENST00000578032 83 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AL590240.4-201ENST00000616908 390 ntBASIC2.57□□□□□ -2
RHBDL3P58872 AC099654.5-201ENST00000636479 350 ntBASIC2.57□□□□□ -2
RHBDL3P58872 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.57□□□□□ -2
RHBDL3P58872 KPNA2P1-201ENST00000458289 1591 ntBASIC2.57□□□□□ -2
RHBDL3P58872 ZNF204P-201ENST00000416749 2397 ntBASIC2.56□□□□□ -2
RHBDL3P58872 MIR597-201ENST00000384968 97 ntBASIC2.56□□□□□ -2
RHBDL3P58872 RPS3AP52-201ENST00000435639 297 ntBASIC2.56□□□□□ -2
RHBDL3P58872 RPL23AP6-201ENST00000446637 472 ntBASIC2.56□□□□□ -2
RHBDL3P58872 FO393415.2-201ENST00000480085 343 ntBASIC2.56□□□□□ -2
RHBDL3P58872 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
RHBDL3P58872 Y_RNA.708-201ENST00000516950 96 ntBASIC2.56□□□□□ -2
RHBDL3P58872 SUMO2P18-201ENST00000518873 252 ntBASIC2.56□□□□□ -2
RHBDL3P58872 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
RHBDL3P58872 AC010928.2-201ENST00000588017 287 ntBASIC2.56□□□□□ -2
RHBDL3P58872 AL627230.6-201ENST00000611129 280 ntBASIC2.56□□□□□ -2
RHBDL3P58872 AL162373.1-201ENST00000620433 407 ntBASIC2.56□□□□□ -2
RHBDL3P58872 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
RHBDL3P58872 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RHBDL3P58872 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RHBDL3P58872 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.56□□□□□ -2
RHBDL3P58872 RNU6-595P-201ENST00000363944 107 ntBASIC2.55□□□□□ -2
RHBDL3P58872 RNU6-601P-201ENST00000384540 107 ntBASIC2.55□□□□□ -2
RHBDL3P58872 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.55□□□□□ -2
RHBDL3P58872 AL445646.1-201ENST00000431784 216 ntBASIC2.55□□□□□ -2
RHBDL3P58872 AL591806.2-201ENST00000433122 173 ntBASIC2.55□□□□□ -2
RHBDL3P58872 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.55□□□□□ -2
RHBDL3P58872 MTCO3P8-201ENST00000453691 755 ntBASIC2.55□□□□□ -2
RHBDL3P58872 PMCHL2-203ENST00000457791 237 ntBASIC2.55□□□□□ -2
RHBDL3P58872 RPL30P10-201ENST00000488148 337 ntBASIC2.55□□□□□ -2
RHBDL3P58872 RNU6-344P-201ENST00000516635 111 ntBASIC2.55□□□□□ -2
RHBDL3P58872 RNU6-58P-201ENST00000517143 103 ntBASIC2.55□□□□□ -2
RHBDL3P58872 DEFB131C-201ENST00000528817 165 ntBASIC2.55□□□□□ -2
RHBDL3P58872 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.55□□□□□ -2
RHBDL3P58872 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.55□□□□□ -2
RHBDL3P58872 AC104581.2-201ENST00000572227 430 ntBASIC2.55□□□□□ -2
RHBDL3P58872 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.55□□□□□ -2
RHBDL3P58872 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
RHBDL3P58872 RNA5SP276-201ENST00000362580 94 ntBASIC2.54□□□□□ -2
RHBDL3P58872 RNU6-17P-201ENST00000384245 107 ntBASIC2.54□□□□□ -2
RHBDL3P58872 RNU6-18P-201ENST00000384527 107 ntBASIC2.54□□□□□ -2
RHBDL3P58872 SNORA48.1-201ENST00000390879 135 ntBASIC2.54□□□□□ -2
RHBDL3P58872 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
RHBDL3P58872 HMGB1P18-201ENST00000438801 619 ntBASIC2.54□□□□□ -2
RHBDL3P58872 AC067942.3-201ENST00000512025 362 ntBASIC2.54□□□□□ -2
RHBDL3P58872 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
RHBDL3P58872 RRN3P3-201ENST00000549207 578 ntBASIC2.54□□□□□ -2
RHBDL3P58872 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
RHBDL3P58872 AC005899.2-201ENST00000584353 90 ntBASIC2.54□□□□□ -2
RHBDL3P58872 AL773524.1-201ENST00000614065 229 ntBASIC2.54□□□□□ -2
RHBDL3P58872 PISRT1.1-201ENST00000616930 107 ntBASIC2.54□□□□□ -2
RHBDL3P58872 AL133216.2-202ENST00000634512 349 ntBASIC2.54□□□□□ -2
RHBDL3P58872 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RHBDL3P58872 AC245060.5-201ENST00000610778 3293 ntBASIC2.53□□□□□ -2
RHBDL3P58872 RNU6-545P-201ENST00000362681 104 ntBASIC2.53□□□□□ -2
RHBDL3P58872 SNORA8-201ENST00000384574 139 ntBASIC2.53□□□□□ -2
RHBDL3P58872 Y_RNA.533-201ENST00000384596 114 ntBASIC2.53□□□□□ -2
RHBDL3P58872 MIR586-201ENST00000385035 97 ntBASIC2.53□□□□□ -2
RHBDL3P58872 RNU6-1050P-201ENST00000410388 107 ntBASIC2.53□□□□□ -2
RHBDL3P58872 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.53□□□□□ -2
RHBDL3P58872 AC244636.1-201ENST00000421152 228 ntBASIC2.53□□□□□ -2
RHBDL3P58872 HMGN2P38-201ENST00000423806 265 ntBASIC2.53□□□□□ -2
RHBDL3P58872 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.53□□□□□ -2
RHBDL3P58872 MTCO1P44-201ENST00000441935 243 ntBASIC2.53□□□□□ -2
RHBDL3P58872 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.53□□□□□ -2
RHBDL3P58872 MRPS17P9-201ENST00000511924 393 ntBASIC2.53□□□□□ -2
RHBDL3P58872 Y_RNA.706-201ENST00000516933 99 ntBASIC2.53□□□□□ -2
RHBDL3P58872 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.53□□□□□ -2
RHBDL3P58872 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.53□□□□□ -2
RHBDL3P58872 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.53□□□□□ -2
RHBDL3P58872 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.53□□□□□ -2
RHBDL3P58872 AC011494.1-201ENST00000596454 237 ntBASIC2.53□□□□□ -2
RHBDL3P58872 AC100812.1-201ENST00000607622 580 ntBASIC2.53□□□□□ -2
RHBDL3P58872 AC005296.1-201ENST00000616145 209 ntBASIC2.53□□□□□ -2
RHBDL3P58872 AC022306.2-201ENST00000617563 647 ntBASIC2.53□□□□□ -2
RHBDL3P58872 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
RHBDL3P58872 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.53□□□□□ -2
RHBDL3P58872 AC099654.14-201ENST00000638599 341 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms