Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU6-498P-201ENST00000459468 107 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 RNU6-1037P-201ENST00000459571 107 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN18P56856 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN18P56856 MIR3915-201ENST00000578518 97 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 AL391646.1-201ENST00000603860 190 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 AC068792.1-201ENST00000621354 417 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN18P56856 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CLDN18P56856 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-1123P-201ENST00000362347 106 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-227P-201ENST00000362865 103 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 SNORA33-201ENST00000363664 130 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-1305P-201ENST00000364353 104 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-1080P-201ENST00000383982 107 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-975P-201ENST00000384296 105 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 MT-TH-201ENST00000387441 69 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 RNU6-903P-201ENST00000391270 109 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 AL356776.1-201ENST00000406574 447 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 NFU1P2-201ENST00000448700 469 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.95□□□□□ -2.26
CLDN18P56856 RNU7-138P-201ENST00000459479 64 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN18P56856 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN18P56856 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 AC016727.2-201ENST00000603988 621 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.95□□□□□ -2.26
CLDN18P56856 MIR6504-201ENST00000613520 61 ntBASIC0.95□□□□□ -2.26
CLDN18P56856 FGF7P2-201ENST00000332473 296 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 SNORA72.3-201ENST00000365074 132 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 SNORA29-201ENST00000384183 140 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 RNU6-517P-201ENST00000384362 110 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 RNA5SP109-201ENST00000391010 116 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 MIR1287-201ENST00000408492 90 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 MTND3P9-201ENST00000429526 346 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AC016256.1-201ENST00000547971 354 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.94□□□□□ -2.26
CLDN18P56856 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN18P56856 AL929325.1-201ENST00000603096 117 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AC025449.1-201ENST00000603896 529 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AC097065.2-201ENST00000608159 533 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 AC072046.2-201ENST00000618366 268 ntBASIC0.94□□□□□ -2.26
CLDN18P56856 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
CLDN18P56856 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CLDN18P56856 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLDN18P56856 RNU6-534P-201ENST00000364877 106 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLDN18P56856 RPL21P1-201ENST00000399532 476 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 RNU6-57P-201ENST00000411348 103 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN18P56856 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN18P56856 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.93□□□□□ -2.26
CLDN18P56856 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN18P56856 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 HIF1AP1-201ENST00000553642 175 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN18P56856 AL391840.1-201ENST00000571144 367 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 MIR5583-1-201ENST00000580941 59 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
CLDN18P56856 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNU6-1120P-201ENST00000362988 108 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNA5SP219-201ENST00000390940 113 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNA5SP467-201ENST00000391274 118 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 MIR320B2-201ENST00000408479 138 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC010154.1-201ENST00000425857 269 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN18P56856 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC009237.7-201ENST00000447357 229 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 MTND1P27-201ENST00000451117 902 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN18P56856 MTCO3P8-201ENST00000453691 755 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 U8.21-201ENST00000459536 136 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNU7-57P-201ENST00000459540 60 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN18P56856 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN18P56856 AC025465.4-201ENST00000513422 638 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC010493.1-201ENST00000513479 292 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNU6-1069P-201ENST00000516612 133 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 RNU1-142P-201ENST00000516682 145 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC024995.1-201ENST00000523014 93 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 MTND4P7-201ENST00000523876 130 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 MTATP6P3-201ENST00000581686 676 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC068790.2-201ENST00000602601 557 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 SNRPGP20-201ENST00000604477 205 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN18P56856 AC091931.1-201ENST00000623488 728 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN18P56856 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
CLDN18P56856 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
CLDN18P56856 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
CLDN18P56856 RNU4-21P-201ENST00000362802 126 ntBASIC0.91□□□□□ -2.26
CLDN18P56856 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
CLDN18P56856 RNU5A-2P-201ENST00000384337 116 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms