Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPL23AP50-201ENST00000434149 455 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC4P56524 snoU13.30-201ENST00000458951 104 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC145146.1-201ENST00000496370 254 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC4P56524 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.46□□□□□ -2.02
HDAC4P56524 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC4P56524 AC021269.2-201ENST00000532318 330 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC104581.2-201ENST00000572227 430 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 MIR3923-201ENST00000579521 83 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.46□□□□□ -2.02
HDAC4P56524 CYP2C61P-201ENST00000604072 290 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AL355802.3-201ENST00000607571 545 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC005520.5-201ENST00000613926 164 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC087588.2-201ENST00000617667 426 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AC134503.1-201ENST00000633048 54 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
HDAC4P56524 SNORD115-32-201ENST00000364079 82 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 SNORD114-30-201ENST00000364448 72 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 Y_RNA.252-201ENST00000364556 101 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RNU1-51P-201ENST00000365345 176 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 XGY1-201ENST00000381172 446 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RNU6-1227P-201ENST00000383981 107 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RNU6-17P-201ENST00000384245 107 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RNU6-18P-201ENST00000384527 107 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RNU6-1274P-201ENST00000384557 107 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MIR95-201ENST00000385072 81 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MTCYBP2-201ENST00000407745 171 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.45□□□□□ -2.02
HDAC4P56524 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 RN7SL636P-201ENST00000497504 294 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.45□□□□□ -2.02
HDAC4P56524 Y_RNA.673-201ENST00000516306 88 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 SNORA48.11-201ENST00000517015 89 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MIR1244-1-201ENST00000612829 85 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 AC138305.3-201ENST00000624988 240 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MIR1244-3-201ENST00000635744 85 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MIR1244-2-201ENST00000636449 85 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MIR1244-4-202ENST00000636813 85 ntBASIC2.45□□□□□ -2.02
HDAC4P56524 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HDAC4P56524 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.44□□□□□ -2.02
HDAC4P56524 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDAC4P56524 Y_RNA.128-201ENST00000363391 112 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 RNU6-944P-201ENST00000364023 107 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 SNORA51.11-201ENST00000384442 131 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 Y_RNA.577-201ENST00000384794 101 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 MIR32-201ENST00000384965 70 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 MIR208B-201ENST00000401172 77 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 RNU6-1156P-201ENST00000410365 100 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 RPS26P42-201ENST00000413485 326 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 OR2AQ1P-201ENST00000451972 200 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 RN7SKP210-201ENST00000459176 261 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 TOMM22P6-201ENST00000465035 409 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC4P56524 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.44□□□□□ -2.02
HDAC4P56524 RNU6-976P-201ENST00000516086 111 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 SNRPGP18-201ENST00000553000 214 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 AC027288.2-201ENST00000553028 243 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC4P56524 AC004584.2-201ENST00000570407 410 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 MIR4719-201ENST00000585233 84 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 7SK.7-201ENST00000603504 247 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 AC137590.2-201ENST00000619709 240 ntBASIC2.44□□□□□ -2.02
HDAC4P56524 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC4P56524 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HDAC4P56524 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
HDAC4P56524 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 RNY3P11-201ENST00000364153 102 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 MIR549A-201ENST00000385268 96 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 SNORA12-201ENST00000391162 147 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 MIR548P-201ENST00000408336 84 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 AL135786.1-201ENST00000415892 214 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 HMGN2P38-201ENST00000423806 265 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.43□□□□□ -2.02
HDAC4P56524 U8.22-201ENST00000459141 133 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 Y_RNA.631-201ENST00000459607 101 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.43□□□□□ -2.02
HDAC4P56524 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
HDAC4P56524 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.43□□□□□ -2.02
HDAC4P56524 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 Y_RNA.711-201ENST00000516993 102 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 ANP32BP3-201ENST00000559213 706 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 MIR3171-201ENST00000584270 74 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC4P56524 AC007485.1-201ENST00000616755 206 ntBASIC2.43□□□□□ -2.02
HDAC4P56524 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HDAC4P56524 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HDAC4P56524 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HDAC4P56524 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.42□□□□□ -2.02
HDAC4P56524 AC005336.3-201ENST00000623833 2679 ntBASIC2.42□□□□□ -2.02
HDAC4P56524 Y_RNA.445-201ENST00000384168 102 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms