Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ATXN1P54253 AC135776.4-201ENST00000624300 1904 ntBASIC3.21□□□□□ -1.9
ATXN1P54253 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.2□□□□□ -1.9
ATXN1P54253 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
ATXN1P54253 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.2□□□□□ -1.9
ATXN1P54253 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATXN1P54253 AC073325.2-201ENST00000339545 159 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 RNU6-595P-201ENST00000363944 107 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 Y_RNA.400-201ENST00000383963 111 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 MIR518D-201ENST00000385014 87 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 Y_RNA.580-201ENST00000391004 95 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 RPL19P1-201ENST00000411635 428 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.2□□□□□ -1.9
ATXN1P54253 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
ATXN1P54253 AC006026.2-201ENST00000457376 180 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 RPS23P5-201ENST00000495419 428 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 AP002001.1-203ENST00000534002 267 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 AC010186.2-204ENST00000537668 439 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 MIR6129-201ENST00000616087 109 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 ZNF720P1-201ENST00000562403 1939 ntBASIC3.2□□□□□ -1.9
ATXN1P54253 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.2□□□□□ -1.9
ATXN1P54253 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.2□□□□□ -1.9
ATXN1P54253 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATXN1P54253 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ATXN1P54253 MTND5P35-201ENST00000557537 1720 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ATXN1P54253 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD73B-201ENST00000364394 72 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD116-14-201ENST00000383894 92 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD116-17-201ENST00000383929 92 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORA70B-201ENST00000384210 135 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD116-15-201ENST00000384445 92 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD116-20-201ENST00000384529 92 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORD116-19-201ENST00000384729 92 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 Y_RNA.581-201ENST00000391017 97 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.19□□□□□ -1.9
ATXN1P54253 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.19□□□□□ -1.9
ATXN1P54253 MTND4LP9-201ENST00000427694 174 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.19□□□□□ -1.9
ATXN1P54253 AC108938.1-201ENST00000451204 136 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SEPT14P8-201ENST00000508026 178 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 Y_RNA.676-201ENST00000516393 96 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 RNU6-612P-201ENST00000516909 102 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.19□□□□□ -1.9
ATXN1P54253 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.19□□□□□ -1.9
ATXN1P54253 MIR8076-201ENST00000611401 83 ntBASIC3.19□□□□□ -1.9
ATXN1P54253 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
ATXN1P54253 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATXN1P54253 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
ATXN1P54253 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATXN1P54253 RNU6-336P-201ENST00000364891 107 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ATXN1P54253 RNU6-750P-201ENST00000390946 107 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AL591034.2-201ENST00000402839 359 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC096649.2-201ENST00000416186 393 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.18□□□□□ -1.9
ATXN1P54253 MTND3P9-201ENST00000429526 346 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.18□□□□□ -1.9
ATXN1P54253 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
ATXN1P54253 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.18□□□□□ -1.9
ATXN1P54253 HSPE1P25-201ENST00000455484 251 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AP001324.2-201ENST00000461163 319 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC087190.1-201ENST00000484462 480 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC107032.1-201ENST00000485945 480 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC010409.1-201ENST00000487382 476 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 RPL23AP49-201ENST00000492925 468 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
ATXN1P54253 RNU6-496P-201ENST00000516145 99 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 SNORA43.2-201ENST00000516652 128 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 RNU6-56P-201ENST00000516986 93 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC027288.2-201ENST00000553028 243 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC005046.1-201ENST00000608515 625 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 MIR6134-201ENST00000617606 109 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 AC008873.1-201ENST00000625051 138 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATXN1P54253 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
ATXN1P54253 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ATXN1P54253 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATXN1P54253 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ATXN1P54253 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ATXN1P54253 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATXN1P54253 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATXN1P54253 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms