Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 Y_RNA.212-201ENST00000364177 102 ntBASIC1.72□□□□□ -2.13
SMSP52788 Y_RNA.318-201ENST00000365131 97 ntBASIC1.72□□□□□ -2.13
SMSP52788 RNU6-332P-201ENST00000391193 108 ntBASIC1.72□□□□□ -2.13
SMSP52788 NCOR1P3-201ENST00000420479 303 ntBASIC1.72□□□□□ -2.13
SMSP52788 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMSP52788 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.72□□□□□ -2.13
SMSP52788 MTCO3P18-201ENST00000440206 761 ntBASIC1.72□□□□□ -2.13
SMSP52788 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 DAP3P1-201ENST00000441522 278 ntBASIC1.72□□□□□ -2.13
SMSP52788 PPP1R2P5-201ENST00000457256 603 ntBASIC1.72□□□□□ -2.13
SMSP52788 RNU7-187P-201ENST00000458985 68 ntBASIC1.72□□□□□ -2.13
SMSP52788 AC027575.1-201ENST00000481064 460 ntBASIC1.72□□□□□ -2.13
SMSP52788 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
SMSP52788 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
SMSP52788 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
SMSP52788 AC016727.2-201ENST00000603988 621 ntBASIC1.72□□□□□ -2.13
SMSP52788 snoU13.31-201ENST00000607291 104 ntBASIC1.72□□□□□ -2.13
SMSP52788 RMST_3.1-201ENST00000611651 109 ntBASIC1.72□□□□□ -2.13
SMSP52788 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMSP52788 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMSP52788 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
SMSP52788 Y_RNA.132-201ENST00000363421 102 ntBASIC1.71□□□□□ -2.14
SMSP52788 RNU6-1090P-201ENST00000364065 94 ntBASIC1.71□□□□□ -2.14
SMSP52788 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
SMSP52788 Y_RNA.414-201ENST00000384011 101 ntBASIC1.71□□□□□ -2.14
SMSP52788 RNU6-95P-201ENST00000384697 107 ntBASIC1.71□□□□□ -2.14
SMSP52788 MIR1283-1-201ENST00000408494 87 ntBASIC1.71□□□□□ -2.14
SMSP52788 RNA5SP118-201ENST00000410385 109 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC009237.7-201ENST00000447357 229 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.71□□□□□ -2.14
SMSP52788 MTND1P11-201ENST00000456661 876 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.71□□□□□ -2.14
SMSP52788 AC097473.1-201ENST00000508142 408 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
SMSP52788 RNU6-256P-201ENST00000516747 97 ntBASIC1.71□□□□□ -2.14
SMSP52788 RNU6-856P-201ENST00000516959 98 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC016957.1-201ENST00000534895 309 ntBASIC1.71□□□□□ -2.14
SMSP52788 AC146944.4-201ENST00000602697 718 ntBASIC1.71□□□□□ -2.14
SMSP52788 SCARNA4-201ENST00000629045 128 ntBASIC1.71□□□□□ -2.14
SMSP52788 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.71□□□□□ -2.14
SMSP52788 BX322639.1-202ENST00000423987 2213 ntBASIC1.71□□□□□ -2.14
SMSP52788 MTND4P5-201ENST00000435821 1374 ntBASIC1.71□□□□□ -2.14
SMSP52788 SNORD50.1-201ENST00000362987 71 ntBASIC1.7□□□□□ -2.14
SMSP52788 Y_RNA.450-201ENST00000384198 113 ntBASIC1.7□□□□□ -2.14
SMSP52788 RNU2-20P-201ENST00000410425 191 ntBASIC1.7□□□□□ -2.14
SMSP52788 AL353572.1-201ENST00000442490 417 ntBASIC1.7□□□□□ -2.14
SMSP52788 AC079354.2-201ENST00000453523 154 ntBASIC1.7□□□□□ -2.14
SMSP52788 AC087477.1-201ENST00000465747 340 ntBASIC1.7□□□□□ -2.14
SMSP52788 RPL23AP75-201ENST00000491601 451 ntBASIC1.7□□□□□ -2.14
SMSP52788 MTND1P35-201ENST00000526739 508 ntBASIC1.7□□□□□ -2.14
SMSP52788 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
SMSP52788 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.7□□□□□ -2.14
SMSP52788 MIR3672-201ENST00000584290 82 ntBASIC1.7□□□□□ -2.14
SMSP52788 SNRPGP19-201ENST00000603826 189 ntBASIC1.7□□□□□ -2.14
SMSP52788 SNRPGP20-201ENST00000604477 205 ntBASIC1.7□□□□□ -2.14
SMSP52788 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMSP52788 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.7□□□□□ -2.14
SMSP52788 Y_RNA.3-201ENST00000362331 103 ntBASIC1.69□□□□□ -2.14
SMSP52788 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
SMSP52788 SNORD115-8-201ENST00000363856 82 ntBASIC1.69□□□□□ -2.14
SMSP52788 SNORD115-38-201ENST00000365037 82 ntBASIC1.69□□□□□ -2.14
SMSP52788 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
SMSP52788 Y_RNA.573-201ENST00000384763 105 ntBASIC1.69□□□□□ -2.14
SMSP52788 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SMSP52788 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SMSP52788 AC004386.2-201ENST00000441858 148 ntBASIC1.69□□□□□ -2.14
SMSP52788 ATP5J2P3-201ENST00000451550 258 ntBASIC1.69□□□□□ -2.14
SMSP52788 PCMTD1P1-201ENST00000455560 355 ntBASIC1.69□□□□□ -2.14
SMSP52788 AL163540.1-201ENST00000485382 386 ntBASIC1.69□□□□□ -2.14
SMSP52788 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
SMSP52788 MTCO2P30-201ENST00000503662 364 ntBASIC1.69□□□□□ -2.14
SMSP52788 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.69□□□□□ -2.14
SMSP52788 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.69□□□□□ -2.14
SMSP52788 MIR4781-201ENST00000585250 76 ntBASIC1.69□□□□□ -2.14
SMSP52788 AP000907.4-201ENST00000604143 237 ntBASIC1.69□□□□□ -2.14
SMSP52788 MIR3976-201ENST00000606807 139 ntBASIC1.69□□□□□ -2.14
SMSP52788 AL353149.1-201ENST00000610667 244 ntBASIC1.69□□□□□ -2.14
SMSP52788 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.69□□□□□ -2.14
SMSP52788 AL159152.1-201ENST00000635019 2587 ntBASIC1.69□□□□□ -2.14
SMSP52788 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.69□□□□□ -2.14
SMSP52788 RNU6-545P-201ENST00000362681 104 ntBASIC1.68□□□□□ -2.14
SMSP52788 Y_RNA.151-201ENST00000363566 112 ntBASIC1.68□□□□□ -2.14
SMSP52788 SNORD115-32-201ENST00000364079 82 ntBASIC1.68□□□□□ -2.14
SMSP52788 Y_RNA.226-201ENST00000364337 114 ntBASIC1.68□□□□□ -2.14
SMSP52788 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SMSP52788 U8.10-201ENST00000384260 133 ntBASIC1.68□□□□□ -2.14
SMSP52788 Y_RNA.554-201ENST00000384672 102 ntBASIC1.68□□□□□ -2.14
SMSP52788 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
SMSP52788 RPS29P25-201ENST00000481709 171 ntBASIC1.68□□□□□ -2.14
SMSP52788 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
SMSP52788 MIR5006-201ENST00000583027 110 ntBASIC1.68□□□□□ -2.14
SMSP52788 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.68□□□□□ -2.14
SMSP52788 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
SMSP52788 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms