Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MIR300-201ENST00000401138 83 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 ARL5AP1-201ENST00000418991 388 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.3□□□□□ -2.2
FDFT1P37268 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
FDFT1P37268 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.3□□□□□ -2.2
FDFT1P37268 MTND3P16-201ENST00000452205 344 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RNU6-1208P-201ENST00000459588 107 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.3□□□□□ -2.2
FDFT1P37268 AC091885.1-201ENST00000506658 268 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AC092436.3-201ENST00000511788 257 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RNA5SP481-201ENST00000516814 122 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 MRPS36P4-201ENST00000534436 298 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.3□□□□□ -2.2
FDFT1P37268 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AC016727.2-201ENST00000603988 621 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 AC068792.1-201ENST00000621354 417 ntBASIC1.3□□□□□ -2.2
FDFT1P37268 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
FDFT1P37268 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
FDFT1P37268 MTND5P26-201ENST00000426018 1752 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU5B-2P-201ENST00000363036 113 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 Y_RNA.140-201ENST00000363474 103 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU6-1085P-201ENST00000363576 107 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU6-1286P-201ENST00000383871 107 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 MIR521-1-201ENST00000384902 87 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 MIR549A-201ENST00000385268 96 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 MIR1283-1-201ENST00000408494 87 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU6-325P-201ENST00000411132 105 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.29□□□□□ -2.2
FDFT1P37268 AC004386.2-201ENST00000441858 148 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.29□□□□□ -2.2
FDFT1P37268 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.29□□□□□ -2.2
FDFT1P37268 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU6-1332P-201ENST00000516666 104 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RNU6-856P-201ENST00000516959 98 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 AP000907.4-201ENST00000604143 237 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 CTHRC1P1-201ENST00000605383 469 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 RMST_3.1-201ENST00000611651 109 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
FDFT1P37268 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
FDFT1P37268 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.29□□□□□ -2.2
FDFT1P37268 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
FDFT1P37268 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 RNU6-259P-201ENST00000383999 107 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
FDFT1P37268 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
FDFT1P37268 EIF4E2P1-201ENST00000393781 255 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC060773.1-201ENST00000421698 310 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC245047.4-201ENST00000433189 144 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC027119.1-201ENST00000440877 241 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 Y_RNA.638-201ENST00000459374 113 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC067942.3-201ENST00000512025 362 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 RNU6-405P-201ENST00000516637 110 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.28□□□□□ -2.2
FDFT1P37268 AC084364.2-201ENST00000546924 395 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC026470.2-201ENST00000561492 181 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 MIR3976-201ENST00000606807 139 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AL512598.1-201ENST00000610158 273 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 TCL6_2.1-201ENST00000615162 119 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC097520.1-201ENST00000624435 385 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
FDFT1P37268 SNORA63D-201ENST00000364359 132 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 RNU6-933P-201ENST00000384424 107 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 RNA5SP213-201ENST00000391031 106 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 MTCO3P40-201ENST00000392516 676 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.27□□□□□ -2.21
FDFT1P37268 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC069257.2-201ENST00000441819 155 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.27□□□□□ -2.21
FDFT1P37268 AC011406.1-201ENST00000512440 370 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
FDFT1P37268 RNA5SP384-201ENST00000516615 116 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 RNU6-835P-201ENST00000516974 104 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
FDFT1P37268 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.27□□□□□ -2.21
FDFT1P37268 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
FDFT1P37268 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.27□□□□□ -2.21
FDFT1P37268 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 FGF7P1-201ENST00000582820 288 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AP000942.3-201ENST00000603702 160 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AC126177.8-201ENST00000618339 1015 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 AL359697.1-201ENST00000624879 587 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 OR5AK4P-201ENST00000635912 903 ntBASIC1.27□□□□□ -2.21
FDFT1P37268 MIR548B-201ENST00000385247 97 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RNU6-648P-201ENST00000410190 107 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RPS26P42-201ENST00000413485 326 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.26□□□□□ -2.21
FDFT1P37268 AC016717.1-201ENST00000448918 286 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RN7SKP210-201ENST00000459176 261 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms