Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNY1P11-201ENST00000363759 113 ntBASIC-1.35□□□□□ -2.63
VCANP13611 MTCYBP10-201ENST00000424905 650 ntBASIC-1.35□□□□□ -2.63
VCANP13611 MTND5P18-201ENST00000445624 1801 ntBASIC-1.35□□□□□ -2.63
VCANP13611 SUMO1P2-201ENST00000452524 304 ntBASIC-1.35□□□□□ -2.63
VCANP13611 MTND2P24-201ENST00000453434 806 ntBASIC-1.35□□□□□ -2.63
VCANP13611 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC-1.35□□□□□ -2.63
VCANP13611 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.35□□□□□ -2.63
VCANP13611 LARP7P4-201ENST00000481075 878 ntBASIC-1.35□□□□□ -2.63
VCANP13611 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.35□□□□□ -2.63
VCANP13611 SEPT14P17-201ENST00000617978 177 ntBASIC-1.35□□□□□ -2.63
VCANP13611 SCARNA4-201ENST00000629045 128 ntBASIC-1.35□□□□□ -2.63
VCANP13611 RNU6-251P-201ENST00000363235 104 ntBASIC-1.35□□□□□ -2.63
VCANP13611 RNU6-837P-201ENST00000391056 108 ntBASIC-1.35□□□□□ -2.63
VCANP13611 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
VCANP13611 AP003733.2-201ENST00000529409 171 ntBASIC-1.35□□□□□ -2.63
VCANP13611 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.36□□□□□ -2.63
VCANP13611 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.36□□□□□ -2.63
VCANP13611 AP003072.1-201ENST00000531740 145 ntBASIC-1.36□□□□□ -2.63
VCANP13611 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.36□□□□□ -2.63
VCANP13611 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-1.36□□□□□ -2.63
VCANP13611 ZNF299P-201ENST00000406845 1804 ntBASIC-1.36□□□□□ -2.63
VCANP13611 RNU6-702P-201ENST00000364982 107 ntBASIC-1.36□□□□□ -2.63
VCANP13611 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.36□□□□□ -2.63
VCANP13611 RNU6-611P-201ENST00000384276 104 ntBASIC-1.36□□□□□ -2.63
VCANP13611 RNU6-576P-201ENST00000390854 102 ntBASIC-1.36□□□□□ -2.63
VCANP13611 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.36□□□□□ -2.63
VCANP13611 RPS15AP40-201ENST00000419621 391 ntBASIC-1.36□□□□□ -2.63
VCANP13611 AL163973.1-201ENST00000484753 577 ntBASIC-1.36□□□□□ -2.63
VCANP13611 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.36□□□□□ -2.63
VCANP13611 OR9P1P-201ENST00000496431 281 ntBASIC-1.36□□□□□ -2.63
VCANP13611 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-1.36□□□□□ -2.63
VCANP13611 AC124293.1-201ENST00000530034 493 ntBASIC-1.36□□□□□ -2.63
VCANP13611 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.36□□□□□ -2.63
VCANP13611 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AC244250.2-201ENST00000418731 148 ntBASIC-1.37□□□□□ -2.63
VCANP13611 MTCO3P1-205ENST00000422088 832 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-1.37□□□□□ -2.63
VCANP13611 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.37□□□□□ -2.63
VCANP13611 AL442067.1-201ENST00000613261 223 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AC110792.3-201ENST00000595906 1614 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.37□□□□□ -2.63
VCANP13611 AL008629.1-201ENST00000438615 184 ntBASIC-1.37□□□□□ -2.63
VCANP13611 MRPS17P3-201ENST00000465453 385 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AL160314.1-201ENST00000490836 438 ntBASIC-1.37□□□□□ -2.63
VCANP13611 AC105081.1-201ENST00000617727 106 ntBASIC-1.37□□□□□ -2.63
VCANP13611 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.38□□□□□ -2.63
VCANP13611 SNORA75.1-201ENST00000391130 148 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC022137.1-201ENST00000483735 151 ntBASIC-1.38□□□□□ -2.63
VCANP13611 RNY4P37-201ENST00000516225 96 ntBASIC-1.38□□□□□ -2.63
VCANP13611 RNU6-479P-201ENST00000516348 105 ntBASIC-1.38□□□□□ -2.63
VCANP13611 TRAV32-201ENST00000553993 340 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AL391840.1-201ENST00000571144 367 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.38□□□□□ -2.63
VCANP13611 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.38□□□□□ -2.63
VCANP13611 U6.99-201ENST00000637524 83 ntBASIC-1.38□□□□□ -2.63
VCANP13611 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC016907.1-201ENST00000419483 435 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC131055.1-201ENST00000584626 316 ntBASIC-1.38□□□□□ -2.63
VCANP13611 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.38□□□□□ -2.63
VCANP13611 RNU6-194P-201ENST00000363862 105 ntBASIC-1.38□□□□□ -2.63
VCANP13611 MTCO3P12-201ENST00000416718 547 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC023347.2-201ENST00000433994 462 ntBASIC-1.38□□□□□ -2.63
VCANP13611 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.38□□□□□ -2.63
VCANP13611 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-1.38□□□□□ -2.63
VCANP13611 BNIP3P23-201ENST00000599655 511 ntBASIC-1.38□□□□□ -2.63
VCANP13611 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-1.38□□□□□ -2.63
VCANP13611 RMST_4.1-201ENST00000616886 107 ntBASIC-1.38□□□□□ -2.63
VCANP13611 Y_RNA.330-201ENST00000365230 109 ntBASIC-1.39□□□□□ -2.63
VCANP13611 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.39□□□□□ -2.63
VCANP13611 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.39□□□□□ -2.63
VCANP13611 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-1.39□□□□□ -2.63
VCANP13611 RNU6-667P-201ENST00000517186 102 ntBASIC-1.39□□□□□ -2.63
VCANP13611 MIR1-1-201ENST00000362147 71 ntBASIC-1.39□□□□□ -2.63
VCANP13611 MIR655-201ENST00000362159 97 ntBASIC-1.39□□□□□ -2.63
VCANP13611 FABP5P14-201ENST00000437273 393 ntBASIC-1.39□□□□□ -2.63
VCANP13611 RNA5SP437-201ENST00000517249 129 ntBASIC-1.39□□□□□ -2.63
VCANP13611 DEFB131E-201ENST00000532329 154 ntBASIC-1.39□□□□□ -2.63
VCANP13611 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.39□□□□□ -2.63
VCANP13611 DEFB131E-202ENST00000602581 683 ntBASIC-1.39□□□□□ -2.63
VCANP13611 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-1.39□□□□□ -2.63
VCANP13611 ANKRD26P2-201ENST00000445530 1710 ntBASIC-1.39□□□□□ -2.63
VCANP13611 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.39□□□□□ -2.63
VCANP13611 AL133475.1-201ENST00000404414 305 ntBASIC-1.39□□□□□ -2.63
VCANP13611 RNA5SP475-201ENST00000410568 110 ntBASIC-1.39□□□□□ -2.63
VCANP13611 ZNF885P-201ENST00000420174 1098 ntBASIC-1.39□□□□□ -2.63
VCANP13611 AC092573.2-201ENST00000434546 243 ntBASIC-1.39□□□□□ -2.63
VCANP13611 AC104383.1-201ENST00000530297 370 ntBASIC-1.39□□□□□ -2.63
VCANP13611 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.4□□□□□ -2.63
VCANP13611 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
VCANP13611 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.4□□□□□ -2.63
VCANP13611 RNU6-431P-201ENST00000383874 107 ntBASIC-1.4□□□□□ -2.63
VCANP13611 RNU6-1035P-201ENST00000384477 107 ntBASIC-1.4□□□□□ -2.63
VCANP13611 SNORA2B-201ENST00000384583 137 ntBASIC-1.4□□□□□ -2.63
VCANP13611 AL034345.1-201ENST00000407768 123 ntBASIC-1.4□□□□□ -2.63
VCANP13611 AC109329.1-201ENST00000518744 317 ntBASIC-1.4□□□□□ -2.63
VCANP13611 AP003072.5-201ENST00000623872 773 ntBASIC-1.4□□□□□ -2.63
VCANP13611 SNORD83.1-201ENST00000411362 77 ntBASIC-1.4□□□□□ -2.63
VCANP13611 AC107954.1-201ENST00000565906 727 ntBASIC-1.4□□□□□ -2.63
VCANP13611 AL713998.2-201ENST00000604538 1198 ntBASIC-1.4□□□□□ -2.63
VCANP13611 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.41□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms