Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RNU6-331P-201ENST00000384724 107 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 SNORD12-201ENST00000391002 90 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 AC244098.3-201ENST00000424803 96 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
PTPRFP10586 HSFY7P-201ENST00000432672 318 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 HSFY8P-201ENST00000437934 318 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 U7.7-201ENST00000459276 60 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.23□□□□□ -2.37
PTPRFP10586 AC008521.1-201ENST00000587471 187 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 AC116165.2-201ENST00000616705 206 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 7SK.10-201ENST00000621414 298 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 MIR6086-201ENST00000638065 55 ntBASIC0.23□□□□□ -2.37
PTPRFP10586 Y_RNA.110-201ENST00000363220 99 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 RNU6-1106P-201ENST00000390845 107 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 MIR1912-201ENST00000410389 80 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 AC245047.3-201ENST00000429428 127 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 EEF1A1P39-201ENST00000440791 250 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.22□□□□□ -2.37
PTPRFP10586 RNU2-34P-201ENST00000516534 121 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 PCMTD1P2-201ENST00000565017 355 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.22□□□□□ -2.37
PTPRFP10586 AC097372.5-201ENST00000623665 376 ntBASIC0.22□□□□□ -2.37
PTPRFP10586 U3.9-201ENST00000363823 204 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MTCO2P21-201ENST00000419780 677 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 STAG3L5P-204ENST00000443759 179 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MTCYBP1-201ENST00000454315 1119 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC022364.2-201ENST00000457963 554 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 LRRC34P2-201ENST00000514850 553 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 RNU6-922P-201ENST00000516753 99 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MIR4742-201ENST00000581069 85 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC005771.1-201ENST00000585581 349 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL390123.1-201ENST00000603216 237 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 Z98751.3-201ENST00000604447 521 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL158032.1-201ENST00000605401 106 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.21□□□□□ -2.38
PTPRFP10586 AP001596.2-201ENST00000608410 312 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL031667.3-201ENST00000620124 655 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL138960.2-201ENST00000625145 535 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC068647.2-201ENST00000637380 353 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
PTPRFP10586 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
PTPRFP10586 RNU6-199P-201ENST00000362954 107 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 RNU6-116P-201ENST00000384042 109 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MIR329-2-201ENST00000385029 84 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
PTPRFP10586 AL355796.1-201ENST00000406706 323 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 ELOCP4-201ENST00000420090 333 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC007283.2-201ENST00000424739 197 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 RPS25P9-201ENST00000435591 252 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 RPL37P21-201ENST00000435890 276 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 HMGN2P34-201ENST00000437647 269 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.21□□□□□ -2.38
PTPRFP10586 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.21□□□□□ -2.38
PTPRFP10586 AL049829.1-201ENST00000465411 156 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC104136.1-201ENST00000512969 394 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.21□□□□□ -2.38
PTPRFP10586 AC004584.2-201ENST00000570407 410 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MIR4753-201ENST00000585119 83 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC013244.3-201ENST00000605614 388 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL136221.1-201ENST00000621449 509 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL513423.1-201ENST00000621695 132 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AC011155.2-201ENST00000623202 216 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 AL450472.1-202ENST00000637286 180 ntBASIC0.21□□□□□ -2.38
PTPRFP10586 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.21□□□□□ -2.38
PTPRFP10586 AC023934.1-201ENST00000574529 2389 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 RNU6-641P-201ENST00000384006 107 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 RNU6-35P-201ENST00000384530 107 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 MIR300-201ENST00000401138 83 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 MIR891A-201ENST00000401237 79 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 CDK8P2-201ENST00000415020 547 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.2□□□□□ -2.38
PTPRFP10586 MIR5589-201ENST00000579442 60 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 AC146944.4-201ENST00000602697 718 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 AC064807.4-201ENST00000607201 407 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 AC100812.1-201ENST00000607622 580 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
PTPRFP10586 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
PTPRFP10586 SNORD56.2-201ENST00000363242 71 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 Y_RNA.287-201ENST00000364853 94 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
PTPRFP10586 RNU6-975P-201ENST00000384296 105 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 C1DP2-201ENST00000418167 426 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AC093019.1-201ENST00000443135 252 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 C1DP4-201ENST00000455429 424 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.19□□□□□ -2.38
PTPRFP10586 AC116347.2-201ENST00000514912 523 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.19□□□□□ -2.38
PTPRFP10586 AC022217.4-201ENST00000604389 163 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AL353765.1-201ENST00000605514 183 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.19□□□□□ -2.38
PTPRFP10586 MIR1253-201ENST00000408273 105 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 RNA5SP504-201ENST00000410676 117 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 MTATP6P20-201ENST00000414147 562 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AL590135.1-201ENST00000422215 156 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AC019205.3-201ENST00000424573 156 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 AC016700.2-201ENST00000446011 156 ntBASIC0.19□□□□□ -2.38
PTPRFP10586 BET1P1-201ENST00000482276 359 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms