Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.04□□□□□ -2.24
MT-ND4P03905 U8.21-201ENST00000459536 136 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 SRRM1P2-201ENST00000464531 1192 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AC092436.3-201ENST00000511788 257 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AC104383.1-201ENST00000530297 370 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AL157687.1-201ENST00000554853 619 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR5006-201ENST00000583027 110 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR4753-201ENST00000585119 83 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.04□□□□□ -2.24
MT-ND4P03905 AP003465.2-201ENST00000602571 373 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AP001330.5-201ENST00000607176 411 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AL355802.3-201ENST00000607571 545 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AC017083.3-201ENST00000609955 700 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AL512598.1-201ENST00000610158 273 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AL353149.1-201ENST00000610667 244 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR3974-201ENST00000637126 96 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.04□□□□□ -2.24
MT-ND4P03905 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
MT-ND4P03905 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
MT-ND4P03905 Y_RNA.77-201ENST00000362962 107 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 SNORA33-201ENST00000363664 130 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 Y_RNA.167-201ENST00000363735 109 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 RNU6-331P-201ENST00000384724 107 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 DEFB108C-201ENST00000400154 252 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 RPS26P42-201ENST00000413485 326 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 CST2P1-201ENST00000425770 87 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.03□□□□□ -2.24
MT-ND4P03905 AC027119.1-201ENST00000440877 241 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AL359672.1-201ENST00000442302 409 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC073910.1-201ENST00000445047 438 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 MTCO3P8-201ENST00000453691 755 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.03□□□□□ -2.24
MT-ND4P03905 RN7SKP210-201ENST00000459176 261 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AF186996.7-201ENST00000492781 209 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC079140.2-201ENST00000506193 142 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 SNORA19.2-201ENST00000516013 114 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 RNU2-34P-201ENST00000516534 121 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC019176.1-201ENST00000518519 225 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.03□□□□□ -2.24
MT-ND4P03905 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.03□□□□□ -2.24
MT-ND4P03905 MIR4421-201ENST00000578133 69 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AP000907.4-201ENST00000604143 237 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC092807.2-201ENST00000609367 243 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 TCL6_2.1-201ENST00000615162 119 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 AC090582.1-201ENST00000636321 199 ntBASIC1.03□□□□□ -2.24
MT-ND4P03905 SNORA4.2-201ENST00000365313 147 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 SNORA69-201ENST00000383895 132 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU6-968P-201ENST00000384076 107 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU6-975P-201ENST00000384296 105 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU4-62P-201ENST00000410125 130 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU6-325P-201ENST00000411132 105 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.02□□□□□ -2.25
MT-ND4P03905 MTCO2P16-201ENST00000436962 677 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 snoU13.27-201ENST00000459278 104 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU6-261P-201ENST00000459506 102 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC083798.1-201ENST00000472671 131 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.02□□□□□ -2.25
MT-ND4P03905 Y_RNA.654-201ENST00000497848 106 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.02□□□□□ -2.25
MT-ND4P03905 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.02□□□□□ -2.25
MT-ND4P03905 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.02□□□□□ -2.25
MT-ND4P03905 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.02□□□□□ -2.25
MT-ND4P03905 AC026470.2-201ENST00000561492 181 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC015688.6-201ENST00000577737 104 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 FGF7P1-201ENST00000582820 288 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC104458.1-201ENST00000608243 463 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 AC068792.1-201ENST00000621354 417 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 OR5AK4P-201ENST00000635912 903 ntBASIC1.02□□□□□ -2.25
MT-ND4P03905 RNU6-1235P-201ENST00000384559 107 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 MIR194-1-201ENST00000384892 85 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 MRPL35P1-201ENST00000404272 572 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 RPL37P10-201ENST00000412884 288 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 USP9YP14-201ENST00000430663 563 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 MRPS10P2-201ENST00000431226 381 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.01□□□□□ -2.25
MT-ND4P03905 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.01□□□□□ -2.25
MT-ND4P03905 AC009237.7-201ENST00000447357 229 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 NFU1P2-201ENST00000448700 469 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 MTND3P16-201ENST00000452205 344 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.01□□□□□ -2.25
MT-ND4P03905 RNU6-498P-201ENST00000459468 107 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 RNU6-1208P-201ENST00000459588 107 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.01□□□□□ -2.25
MT-ND4P03905 AC010486.3-201ENST00000511602 785 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 RNU6-948P-201ENST00000516374 107 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MT-ND4P03905 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.01□□□□□ -2.25
MT-ND4P03905 AC015712.3-201ENST00000559380 164 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.01□□□□□ -2.25
MT-ND4P03905 CPDP1-201ENST00000579660 283 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 AC073413.2-201ENST00000604332 360 ntBASIC1.01□□□□□ -2.25
MT-ND4P03905 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.01□□□□□ -2.25
MT-ND4P03905 AL078604.3-201ENST00000615580 211 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms