Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 SNORA48.1-201ENST00000390879 135 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPHP1O15259 EIF4EP2-201ENST00000422816 654 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 RPL23AP6-201ENST00000446637 472 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 SNORD13-201ENST00000459299 104 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC007215.1-201ENST00000464893 276 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC082651.2-201ENST00000496833 166 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 RNU2-44P-201ENST00000516795 194 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.4□□□□□ -2.03
NPHP1O15259 MIR5089-201ENST00000580047 84 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC124303.1-201ENST00000605703 360 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC019193.3-201ENST00000609144 554 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP1O15259 AC002553.4-201ENST00000616896 331 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 AC084768.2-201ENST00000622736 221 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.4□□□□□ -2.03
NPHP1O15259 AC022513.1-201ENST00000624512 117 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.4□□□□□ -2.03
NPHP1O15259 SCARNA4-201ENST00000629045 128 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.4□□□□□ -2.03
NPHP1O15259 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP1O15259 RNA5SP160-201ENST00000364866 120 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 MIR676-201ENST00000390702 67 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 RNA5SP212-201ENST00000391223 107 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPHP1O15259 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP1O15259 AC079804.2-201ENST00000490376 200 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 MRPS17P9-201ENST00000511924 393 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 ACA59.1-201ENST00000515966 143 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP1O15259 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP1O15259 AC002984.1-201ENST00000591692 448 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.39□□□□□ -2.03
NPHP1O15259 AC080078.2-201ENST00000603766 501 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 MIR8081-201ENST00000611533 95 ntBASIC2.39□□□□□ -2.03
NPHP1O15259 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP1O15259 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPHP1O15259 CBX3P1-201ENST00000325243 554 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 RNU6-1013P-201ENST00000384180 107 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 MIR549A-201ENST00000385268 96 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NPHP1O15259 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP1O15259 AC004386.2-201ENST00000441858 148 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 MTCO1P44-201ENST00000441935 243 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 AC007395.1-201ENST00000451333 677 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP1O15259 AC010531.2-201ENST00000465012 153 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP1O15259 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.38□□□□□ -2.03
NPHP1O15259 AC005786.1-201ENST00000588553 154 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 snoU13.31-201ENST00000607291 104 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 RMST_6.1-201ENST00000611980 203 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 TCL6_2.1-201ENST00000615162 119 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
NPHP1O15259 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.37□□□□□ -2.03
NPHP1O15259 RNU6-545P-201ENST00000362681 104 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 U8.10-201ENST00000384260 133 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 MIR487A-201ENST00000385009 80 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 SNORA17.3-201ENST00000391159 129 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 AC004866.1-201ENST00000411748 78 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 RNU6-566P-201ENST00000516790 107 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 RNA5SP454-201ENST00000517231 127 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.37□□□□□ -2.03
NPHP1O15259 AC022254.1-201ENST00000567857 235 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 AC018638.8-201ENST00000588755 281 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 AP003465.2-201ENST00000602571 373 ntBASIC2.37□□□□□ -2.03
NPHP1O15259 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NPHP1O15259 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPHP1O15259 MIR337-201ENST00000362281 93 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 RNU6-457P-201ENST00000363999 107 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 RNU6-306P-201ENST00000384617 107 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 AL021397.1-201ENST00000451806 248 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 MTCO3P8-201ENST00000453691 755 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP1O15259 MIR5006-201ENST00000583027 110 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 AC010928.2-201ENST00000588017 287 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHP1O15259 AC093913.1-201ENST00000614178 329 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHP1O15259 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
NPHP1O15259 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NPHP1O15259 Y_RNA.226-201ENST00000364337 114 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 RNU4-9P-201ENST00000364951 139 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 Y_RNA.301-201ENST00000364990 103 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 AL627390.1-201ENST00000396055 340 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 MIR300-201ENST00000401138 83 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.35□□□□□ -2.03
NPHP1O15259 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.35□□□□□ -2.03
NPHP1O15259 Z82188.1-201ENST00000436709 154 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms