Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 Y_RNA.38-201ENST00000362617 102 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-95P-201ENST00000384697 107 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 MTCO1P20-201ENST00000425366 358 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 MTND1P29-201ENST00000448112 647 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-1146P-201ENST00000516282 102 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 AL160236.1-201ENST00000556317 195 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 POLR3GP2-201ENST00000588366 668 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 AC006504.8-201ENST00000621046 635 ntBASIC1.86□□□□□ -2.11
HMGB1P1B2RPK0 SNORD87-201ENST00000364849 89 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-128P-201ENST00000383976 107 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 AC016909.1-201ENST00000415916 166 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 MTND2P22-201ENST00000444325 1033 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 AC079354.2-201ENST00000453523 154 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 MTND1P11-201ENST00000456661 876 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 AL512310.1-201ENST00000548639 172 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 uc_338.5-201ENST00000611839 155 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 MIR7106-201ENST00000612419 65 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 AC004777.1-201ENST00000624317 287 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 snoZ196.1-201ENST00000625269 89 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 MTND5P35-201ENST00000557537 1720 ntBASIC1.85□□□□□ -2.11
HMGB1P1B2RPK0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-727P-201ENST00000363592 107 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-908P-201ENST00000410160 94 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AC010154.1-201ENST00000425857 269 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 MTCO2P30-201ENST00000503662 364 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 RNU6-314P-201ENST00000516574 104 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AL365434.2-201ENST00000607979 234 ntBASIC1.84□□□□□ -2.11
HMGB1P1B2RPK0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 RNU6-1090P-201ENST00000364065 94 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 RNU4-75P-201ENST00000364621 146 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 SNORA72.2-201ENST00000365028 127 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 MIR517A-201ENST00000385001 87 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 RNU6-332P-201ENST00000391193 108 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 MTCO3P18-201ENST00000440206 761 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 RPS29P23-201ENST00000458635 123 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 SNORA25.14-201ENST00000516481 132 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 MTND1P5-201ENST00000517906 940 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 AC245505.1-201ENST00000556398 224 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 AC005000.2-201ENST00000605468 310 ntBASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB1P1B2RPK0 RNA5SP259-201ENST00000365541 109 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 RNA5SP504-201ENST00000410676 117 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AC004965.1-201ENST00000413033 213 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 RPL30P16-201ENST00000419341 429 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AL606517.2-201ENST00000442855 241 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 MTND1P1-201ENST00000445453 368 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 HMGN2P26-201ENST00000463169 339 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 RNU6-273P-201ENST00000516937 96 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 RNA5SP454-201ENST00000517231 127 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AL442163.3-201ENST00000554110 156 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AC019288.1-201ENST00000557918 224 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 CYP3A52P-201ENST00000563326 91 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AF250324.2-201ENST00000608299 610 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 AC009318.2-201ENST00000610917 651 ntBASIC1.82□□□□□ -2.12
HMGB1P1B2RPK0 SNORD46.1-201ENST00000364139 104 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 SNORD26-201ENST00000384147 75 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 MIR194-1-201ENST00000384892 85 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 MIR128-1-201ENST00000384921 82 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 MIR513A1-201ENST00000385138 129 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 RPL21P1-201ENST00000399532 476 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 RNU6-344P-201ENST00000516635 111 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AC025647.1-201ENST00000517879 253 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AC005668.1-201ENST00000571142 476 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 SNORD11B-201ENST00000607707 90 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AC135507.2-201ENST00000612443 309 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AL138726.1-201ENST00000614873 333 ntBASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB1P1B2RPK0 RNU4-9P-201ENST00000364951 139 ntBASIC1.8□□□□□ -2.12
HMGB1P1B2RPK0 Y_RNA.517-201ENST00000384551 106 ntBASIC1.8□□□□□ -2.12
HMGB1P1B2RPK0 RNU6-306P-201ENST00000384617 107 ntBASIC1.8□□□□□ -2.12
HMGB1P1B2RPK0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMGB1P1B2RPK0 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms