Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL118496.2-201ENST00000448300 230 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 RN7SKP210-201ENST00000459176 261 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 SNRPGP7-201ENST00000469016 106 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 RPL36AP48-201ENST00000485521 314 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 SNORD116.3-201ENST00000517176 78 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 SNORD58B-201ENST00000607313 66 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC069294.1-201ENST00000608397 350 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC013412.1-201ENST00000610687 192 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC092268.1-201ENST00000342691 405 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.80-201ENST00000362996 102 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 RNU4-9P-201ENST00000364951 139 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC097463.2-201ENST00000421074 142 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MTCYBP10-201ENST00000424905 650 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC099799.1-201ENST00000439809 192 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 GPM6BP3-201ENST00000442797 145 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 snoU13.30-201ENST00000458951 104 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 HMGB1P35-201ENST00000503360 598 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 ANXA2P1-201ENST00000505539 926 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC092447.9-201ENST00000603395 144 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MIR1244-1-201ENST00000612829 85 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AC040896.1-201ENST00000613819 479 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MIR1244-3-201ENST00000635744 85 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MIR1244-2-201ENST00000636449 85 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MIR1244-4-202ENST00000636813 85 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 AL359854.1-201ENST00000614203 1594 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 MTND5P6-201ENST00000422338 1798 ntBASIC2.44□□□□□ -2.02
SNX9Q9Y5X1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNU1-72P-201ENST00000362976 153 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 SNORD115-32-201ENST00000364079 82 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNY3P11-201ENST00000364153 102 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNU6-142P-201ENST00000384019 107 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNU6-17P-201ENST00000384245 107 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 U8.10-201ENST00000384260 133 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNU6-18P-201ENST00000384527 107 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.645-201ENST00000391229 102 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MIR190B-201ENST00000401119 79 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MTCYBP2-201ENST00000407745 171 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC138623.1-201ENST00000418060 216 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AL590135.1-201ENST00000422215 156 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC019205.3-201ENST00000424573 156 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC016700.2-201ENST00000446011 156 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AL353705.4-201ENST00000449661 238 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC087477.1-201ENST00000465747 340 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AL121594.1-201ENST00000475906 575 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC015911.1-201ENST00000495111 156 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC021146.2-201ENST00000504736 556 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 HMGB3P3-201ENST00000510526 400 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 SNORA25.11-201ENST00000515935 105 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RNU6-988P-201ENST00000519081 107 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC115990.1-201ENST00000526957 301 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC004584.2-201ENST00000570407 410 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MIR4765-201ENST00000585007 77 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC016925.2-201ENST00000605108 242 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AL355802.3-201ENST00000607571 545 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC006157.1-201ENST00000611750 366 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC083806.3-201ENST00000614016 455 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MIR6766-201ENST00000622641 72 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 MIR203B-201ENST00000636080 86 ntBASIC2.43□□□□□ -2.02
SNX9Q9Y5X1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 ZNF658B-202ENST00000615961 3375 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 Z75746.1-201ENST00000440243 2080 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 MTND4P1-201ENST00000457501 1466 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 RNU6-486P-201ENST00000363116 107 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 RNU4-42P-201ENST00000364738 142 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 RNU1-57P-201ENST00000384491 166 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 RNU6-738P-201ENST00000384531 106 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 MIR218-1-201ENST00000384999 110 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 MIR487A-201ENST00000385009 80 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 RNA5SP213-201ENST00000391031 106 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 U6atac.2-201ENST00000408644 118 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 EIF4EP4-201ENST00000424916 578 ntBASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNX9Q9Y5X1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms