Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 U8.2-201ENST00000363156 134 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 RNU6-534P-201ENST00000364877 106 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 RNU6-1215P-201ENST00000384441 102 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 MIR583-201ENST00000384846 75 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AL513185.2-201ENST00000425543 193 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC004386.2-201ENST00000441858 148 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AL353572.1-201ENST00000442490 417 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AL357134.1-201ENST00000445848 426 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC079354.2-201ENST00000453523 154 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC007215.1-201ENST00000464893 276 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 RPL23AP63-201ENST00000498752 471 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 MTCYBP18-201ENST00000501056 747 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 YWHAEP4-201ENST00000505390 198 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC097473.1-201ENST00000508142 408 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 SUMO2P18-201ENST00000518873 252 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 GNAI2P1-201ENST00000541815 315 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 MIR3672-201ENST00000584290 82 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC010928.2-201ENST00000588017 287 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 POLR3GP2-201ENST00000588366 668 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 SCARNA4-201ENST00000629045 128 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.157-201ENST00000363638 102 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MIR517A-201ENST00000385001 87 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MIR1283-1-201ENST00000408494 87 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 RN7SKP101-201ENST00000411376 320 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC009161.1-201ENST00000417306 376 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 NCOR1P3-201ENST00000420479 303 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AL358453.1-201ENST00000422522 250 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MTCO3P46-201ENST00000425787 232 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 RPL23AP75-201ENST00000491601 451 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MTCO2P30-201ENST00000503662 364 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC091544.4-201ENST00000555268 342 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 SUB1P4-201ENST00000566062 339 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MIR5006-201ENST00000583027 110 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AP000907.4-201ENST00000604143 237 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC009318.2-201ENST00000610917 651 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 AC009033.1-201ENST00000624279 431 ntBASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.34□□□□□ -2.19
CCL28Q9NRJ3 MTND4P5-201ENST00000435821 1374 ntBASIC1.34□□□□□ -2.2
CCL28Q9NRJ3 AL159152.1-201ENST00000635019 2587 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 SNORD116-11-201ENST00000383882 92 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MIR634-201ENST00000385208 97 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 Z82205.1-201ENST00000428456 297 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MTND1P34-201ENST00000438556 671 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC009237.7-201ENST00000447357 229 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MTCO3P8-201ENST00000453691 755 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 UBE2DNL-203ENST00000474922 222 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 RPS29P25-201ENST00000481709 171 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC091435.1-201ENST00000505442 584 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 RNU2-34P-201ENST00000516534 121 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MIR4753-201ENST00000585119 83 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 SNRPGP20-201ENST00000604477 205 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC116312.1-201ENST00000606841 314 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC083806.3-201ENST00000614016 455 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AC090517.2-201ENST00000614966 680 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 MIR3688-2-201ENST00000636963 87 ntBASIC1.33□□□□□ -2.2
CCL28Q9NRJ3 AL356292.1-201ENST00000283110 373 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 RNU4-9P-201ENST00000364951 139 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 U8.10-201ENST00000384260 133 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 MIR549A-201ENST00000385268 96 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 SNORD115-47-201ENST00000391226 86 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC004866.1-201ENST00000411748 78 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 RPS20P15-201ENST00000412792 311 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC010409.1-201ENST00000487382 476 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 RPS29P21-201ENST00000496272 170 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms