Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNU6-45P-201ENST00000384471 107 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNU6-910P-201ENST00000390844 107 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 MTCYBP36-201ENST00000404146 440 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNA5SP511-201ENST00000410487 115 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 CDK8P2-201ENST00000415020 547 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 SNAP23P1-201ENST00000433229 246 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 MTCYBP1-201ENST00000454315 1119 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL163973.1-201ENST00000484753 577 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 RNA5SP285-201ENST00000516619 119 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL590705.4-201ENST00000532209 134 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC078795.3-201ENST00000602913 472 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AC009509.4-201ENST00000619202 509 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 AL450472.1-202ENST00000637286 180 ntBASIC0.64□□□□□ -2.31
UPF3BQ9BZI7 snoU2-30.2-201ENST00000362805 70 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 RNU6-157P-201ENST00000383957 107 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 SRRM1P2-201ENST00000464531 1192 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC008628.2-201ENST00000502605 298 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC079140.5-201ENST00000507882 310 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC025423.5-201ENST00000550230 219 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 Z98751.3-201ENST00000604447 521 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC021506.2-201ENST00000612354 169 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC243829.6-201ENST00000612652 106 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 AC138649.3-201ENST00000622154 254 ntBASIC0.63□□□□□ -2.31
UPF3BQ9BZI7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 RNU6-552P-201ENST00000362869 119 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 RNU6-179P-201ENST00000363350 107 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 RNU6-641P-201ENST00000384006 107 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC011233.1-201ENST00000422812 283 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 USP9YP28-201ENST00000435142 589 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC073614.1-201ENST00000438690 650 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC245047.7-201ENST00000440265 293 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AL031313.1-201ENST00000448435 256 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 RAP1BP2-201ENST00000478270 544 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 RNU6-948P-201ENST00000516374 107 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC090517.1-201ENST00000569307 266 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 AC019226.2-201ENST00000625973 424 ntBASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
UPF3BQ9BZI7 Y_RNA.22-201ENST00000362492 102 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-25P-201ENST00000383873 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-418P-201ENST00000384035 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-48P-201ENST00000384161 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-809P-201ENST00000384461 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-15P-201ENST00000384534 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-29P-201ENST00000384637 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RNU6-1031P-201ENST00000384773 107 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MIR605-201ENST00000385078 83 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MRPL42P2-201ENST00000403169 426 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MIR1283-1-201ENST00000408494 87 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MTND1P20-201ENST00000430341 950 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MTCO3P18-201ENST00000440206 761 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 RPS27P22-201ENST00000478056 241 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MTCO3P7-201ENST00000510008 774 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 AC069431.2-201ENST00000604149 1099 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 MIR2909-201ENST00000617113 69 ntBASIC0.61□□□□□ -2.31
UPF3BQ9BZI7 Y_RNA.18-201ENST00000362461 102 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 RPS3AP1-201ENST00000413190 320 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 AC084290.1-201ENST00000434995 374 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 C1DP4-201ENST00000455429 424 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 MTND4LP18-201ENST00000526864 291 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 Z99289.3-201ENST00000605586 594 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 AC087588.2-201ENST00000617667 426 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 AL445984.1-201ENST00000637834 659 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 MTND5P17-201ENST00000418405 1603 ntBASIC0.6□□□□□ -2.31
UPF3BQ9BZI7 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 Y_RNA.608-201ENST00000410647 95 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 HSFY7P-201ENST00000432672 318 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 HSFY8P-201ENST00000437934 318 ntBASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.59□□□□□ -2.31
UPF3BQ9BZI7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms