Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNORD115-32-201ENST00000364079 82 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 RNU6-1011P-201ENST00000384668 107 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 MIR549A-201ENST00000385268 96 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 RNA5SP450-201ENST00000411206 102 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 RNU7-175P-201ENST00000515915 61 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.701-201ENST00000516812 110 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 MIR4287-201ENST00000579398 78 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 MIR4435-1-201ENST00000582552 80 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 AC010928.2-201ENST00000588017 287 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 CYP2C61P-201ENST00000604072 290 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 CTSLP2-204ENST00000629029 392 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 AC243829.7-201ENST00000633081 225 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 ZNF204P-201ENST00000416749 2397 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 LINC02555-201ENST00000563933 1951 ntBASIC2.49□□□□□ -2.01
HERPUD2Q9BSE4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.2-201ENST00000362330 96 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.263-201ENST00000364659 114 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.482-201ENST00000384377 111 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.529-201ENST00000384586 119 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 SNORA41-201ENST00000384675 132 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 MIR300-201ENST00000401138 83 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 IPO7P1-201ENST00000442031 636 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AC007677.1-201ENST00000445757 515 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AC007395.1-201ENST00000451333 677 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 RN7SKP210-201ENST00000459176 261 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AL590705.4-201ENST00000532209 134 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 PISRT1.1-201ENST00000616930 107 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 ZNF702P-202ENST00000434269 1966 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 BX322639.1-202ENST00000423987 2213 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
HERPUD2Q9BSE4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 U8.10-201ENST00000384260 133 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 RNU6-842P-201ENST00000384269 107 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 RNU6-1050P-201ENST00000410388 107 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 PDCL2P1-201ENST00000419302 352 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC243428.1-201ENST00000421099 264 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 MTCO3P8-201ENST00000453691 755 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC103851.1-201ENST00000506833 274 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 Y_RNA.708-201ENST00000516950 96 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 DEFB131C-201ENST00000528817 165 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC087441.2-201ENST00000529141 262 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 MIR4753-201ENST00000585119 83 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 AC011494.1-201ENST00000596454 237 ntBASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HERPUD2Q9BSE4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 RNA5SP276-201ENST00000362580 94 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 RNU6-545P-201ENST00000362681 104 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 RNU4-73P-201ENST00000363164 141 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.184-201ENST00000363884 108 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.319-201ENST00000365138 92 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.339-201ENST00000365325 102 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 Y_RNA.490-201ENST00000384413 102 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 MIR597-201ENST00000384968 97 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AL512604.1-201ENST00000404812 257 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 NCOR1P3-201ENST00000420479 303 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC139712.2-201ENST00000424302 339 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 USMG5P1-201ENST00000425964 177 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 MTCYBP6-201ENST00000441810 138 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC009237.7-201ENST00000447357 229 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC016925.1-201ENST00000458303 298 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 MTND3P22-201ENST00000510932 243 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC026782.1-201ENST00000512952 449 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AL158827.2-201ENST00000602494 330 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC103810.6-201ENST00000606708 136 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AL691447.3-201ENST00000635020 330 ntBASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HERPUD2Q9BSE4 AC008555.8-201ENST00000623602 2168 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms