Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RPS29P26-201ENST00000477483 171 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AC091959.1-201ENST00000495857 238 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 UBL5P4-201ENST00000562584 236 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AL713866.2-201ENST00000603579 219 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AL356157.2-201ENST00000605122 111 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 AC024581.2-201ENST00000619986 252 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 U6.106-201ENST00000636360 105 ntBASIC2.68□□□□□ -1.98
ZNF48Q96MX3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF48Q96MX3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MIR410-201ENST00000362222 80 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-626P-201ENST00000363354 107 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-961P-201ENST00000363893 105 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-20P-201ENST00000384106 107 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-514P-201ENST00000384208 107 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 SNORD116-20-201ENST00000384529 92 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MIR487A-201ENST00000385009 80 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MIR329-1-201ENST00000385028 80 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-159P-201ENST00000391080 106 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RPL26P27-201ENST00000414397 437 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AL390729.2-201ENST00000416137 156 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 WARS2P1-201ENST00000429678 537 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MTCO1P5-201ENST00000433573 344 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC007969.2-201ENST00000441891 191 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 SNORD2.1-201ENST00000458762 69 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RPL27AP5-201ENST00000469428 449 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RPL31P41-201ENST00000477967 372 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AP001025.1-201ENST00000486139 332 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RPS29P20-201ENST00000489592 171 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC006445.1-201ENST00000491925 405 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MRPS36P2-201ENST00000512569 299 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RNU7-200P-201ENST00000516105 62 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 MIR5571-201ENST00000577998 113 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AC008749.1-201ENST00000597650 306 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.67□□□□□ -1.98
ZNF48Q96MX3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF48Q96MX3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC093010.3-201ENST00000570269 15214 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-137P-201ENST00000363680 108 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-704P-201ENST00000364162 103 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU1-140P-201ENST00000365040 165 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU1-100P-201ENST00000365255 165 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU1-73P-201ENST00000383971 164 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-142P-201ENST00000384019 107 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 MIR613-201ENST00000385248 95 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 BMS1P22-201ENST00000414726 313 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC244505.4-201ENST00000434905 287 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 SSXP5-201ENST00000443473 287 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 MRPS10P1-201ENST00000448483 130 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AP001324.2-201ENST00000461163 319 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC091021.1-201ENST00000468051 388 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC097462.2-201ENST00000504623 481 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-346P-201ENST00000516288 111 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 SNORA27.4-201ENST00000516650 95 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 MIR2276-201ENST00000516886 89 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RNU6-58P-201ENST00000517143 103 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 RPL21P9-201ENST00000556149 474 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 MIR6134-201ENST00000617606 109 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.66□□□□□ -1.98
ZNF48Q96MX3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ZNF48Q96MX3 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms