Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL138963.2-201ENST00000605137 226 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AL050343.2-201ENST00000607338 280 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC009229.3-201ENST00000608056 282 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC009318.2-201ENST00000610917 651 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.69□□□□□ -2.14
CKAP4Q07065 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.69□□□□□ -2.14
CKAP4Q07065 AL359314.1-201ENST00000616913 261 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CKAP4Q07065 AC007792.1-201ENST00000623023 402 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 MTND4LP32-201ENST00000636111 270 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AL669831.3-213ENST00000636676 183 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AL450472.1-202ENST00000637286 180 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.69□□□□□ -2.14
CKAP4Q07065 Y_RNA.11-201ENST00000362375 109 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 Y_RNA.473-201ENST00000384333 102 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 RNU6-310P-201ENST00000384655 107 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 MIR521-1-201ENST00000384902 87 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC097463.2-201ENST00000421074 142 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC236972.2-201ENST00000434979 310 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC112771.1-201ENST00000463581 102 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 RPL7P42-201ENST00000481005 679 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 RPL22P13-201ENST00000493291 347 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AC097473.1-201ENST00000508142 408 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC005741.1-201ENST00000511094 432 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 RNA5SP112-201ENST00000515937 99 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 RNA5SP137-201ENST00000516833 135 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC109446.1-201ENST00000566172 220 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AL355297.2-201ENST00000604792 129 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 AL133255.1-201ENST00000606374 441 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.68□□□□□ -2.14
CKAP4Q07065 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CKAP4Q07065 AC006026.1-201ENST00000444025 1803 ntBASIC1.68□□□□□ -2.14
CKAP4Q07065 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CKAP4Q07065 Z75746.1-201ENST00000440243 2080 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 Y_RNA.123-201ENST00000363338 102 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 Y_RNA.259-201ENST00000364619 101 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 RNU1-57P-201ENST00000384491 166 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 MIR186-201ENST00000384988 86 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 SNORA75.6-201ENST00000391318 127 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 RNU2-63P-201ENST00000410792 194 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 Y_RNA.646-201ENST00000410980 101 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 MTCO2P27-201ENST00000420740 428 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC243428.1-201ENST00000421099 264 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC008267.5-201ENST00000424928 265 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 USMG5P1-201ENST00000425964 177 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.67□□□□□ -2.14
CKAP4Q07065 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.67□□□□□ -2.14
CKAP4Q07065 MTCO3P10-201ENST00000455912 772 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 RPL30P1-201ENST00000488676 339 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC016632.1-201ENST00000503994 196 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC022447.4-201ENST00000504053 364 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.67□□□□□ -2.14
CKAP4Q07065 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.67□□□□□ -2.14
CKAP4Q07065 RNA5SP384-201ENST00000516615 116 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 RNU6-1213P-201ENST00000517075 94 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.67□□□□□ -2.14
CKAP4Q07065 AC115990.1-201ENST00000526957 301 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.67□□□□□ -2.14
CKAP4Q07065 AL158827.2-201ENST00000602494 330 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AL691447.3-201ENST00000635020 330 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 MTND4P29-201ENST00000503122 1372 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 AC009541.1-201ENST00000438279 2662 ntBASIC1.67□□□□□ -2.14
CKAP4Q07065 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CKAP4Q07065 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CKAP4Q07065 AP006437.1-201ENST00000641440 3685 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AC092268.1-201ENST00000342691 405 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 RNU1-72P-201ENST00000362976 153 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 RNU5B-2P-201ENST00000363036 113 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.187-201ENST00000363918 113 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 RNU4-76P-201ENST00000364509 141 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.813-201ENST00000364639 102 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.315-201ENST00000365117 102 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.431-201ENST00000384086 102 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.460-201ENST00000384255 102 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CKAP4Q07065 RNU6-1304P-201ENST00000411374 106 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 Z82205.1-201ENST00000428456 297 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AC244670.1-201ENST00000436879 112 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AL513124.1-201ENST00000450410 614 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.66□□□□□ -2.14
CKAP4Q07065 Y_RNA.653-201ENST00000459091 95 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AL121594.1-201ENST00000475906 575 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 FO393415.2-201ENST00000480085 343 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.66□□□□□ -2.14
CKAP4Q07065 RNU5F-2P-201ENST00000516066 82 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AP000889.1-201ENST00000530968 660 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 HSPE1P4-201ENST00000550617 308 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.66□□□□□ -2.14
CKAP4Q07065 AC005899.2-201ENST00000584353 90 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 AC073410.2-201ENST00000603240 332 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 PISRT1.1-201ENST00000616930 107 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 259.3 ms