Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR4711-201ENST00000578274 70 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AL390123.1-201ENST00000603216 237 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC104458.1-201ENST00000608243 463 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AL360219.1-201ENST00000610230 366 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC005520.5-201ENST00000613926 164 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 MIR8054-201ENST00000620877 86 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
HIST1H3AP68431 Y_RNA.97-201ENST00000363094 102 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 Y_RNA.224-201ENST00000364308 111 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 Y_RNA.287-201ENST00000364853 94 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 RNU6-116P-201ENST00000384042 109 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 SNORD116-13-201ENST00000384408 92 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 MIR549A-201ENST00000385268 96 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 SNORA75.2-201ENST00000391138 150 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 SNORA75.3-201ENST00000391231 150 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 RNU6-757P-201ENST00000410334 100 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.29□□□□□ -2.36
HIST1H3AP68431 AC010486.2-201ENST00000505572 483 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 AC091874.1-201ENST00000511402 339 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 MTND4LP18-201ENST00000526864 291 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.29□□□□□ -2.36
HIST1H3AP68431 MIR4778-201ENST00000577635 80 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 AC146944.4-201ENST00000602697 718 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.29□□□□□ -2.36
HIST1H3AP68431 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.29□□□□□ -2.36
HIST1H3AP68431 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
HIST1H3AP68431 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.28□□□□□ -2.36
HIST1H3AP68431 RNU6-179P-201ENST00000363350 107 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 MIR660-201ENST00000385235 97 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AL451046.2-201ENST00000403074 277 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 ELOCP4-201ENST00000420090 333 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AL356583.2-201ENST00000426536 280 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC233266.1-201ENST00000454518 96 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 MTCO2P29-201ENST00000465212 189 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AL049830.1-201ENST00000468034 425 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.28□□□□□ -2.36
HIST1H3AP68431 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC025465.4-201ENST00000513422 638 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 RNU1-142P-201ENST00000516682 145 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC022217.4-201ENST00000604389 163 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC242852.1-201ENST00000612151 96 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AL136221.1-201ENST00000621449 509 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 AC244015.1-201ENST00000622301 99 ntBASIC0.28□□□□□ -2.36
HIST1H3AP68431 Y_RNA.302-201ENST00000364997 102 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 RNU6-975P-201ENST00000384296 105 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 RNU6-1257P-201ENST00000384625 110 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AL034345.1-201ENST00000407768 123 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 RNU6-387P-201ENST00000411331 105 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC012306.1-201ENST00000423267 114 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
HIST1H3AP68431 AL031313.1-201ENST00000448435 256 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC079382.1-201ENST00000493346 557 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC112204.1-201ENST00000502591 103 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC008628.2-201ENST00000502605 298 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC016957.1-201ENST00000534895 309 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC090049.2-201ENST00000550377 109 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC097065.2-201ENST00000608159 533 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC073349.3-201ENST00000617616 186 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AC068787.1-201ENST00000623908 691 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 AL359697.1-201ENST00000624879 587 ntBASIC0.27□□□□□ -2.37
HIST1H3AP68431 RNU6-199P-201ENST00000362954 107 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 RNU6-1303P-201ENST00000364841 107 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 Y_RNA.354-201ENST00000365448 111 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
HIST1H3AP68431 MIR653-201ENST00000385279 96 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 RNU6-440P-201ENST00000390882 105 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 RPS29P13-201ENST00000402041 169 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC245047.3-201ENST00000429428 127 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 RPL37P21-201ENST00000435890 276 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AL031274.1-201ENST00000450334 232 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC013470.1-201ENST00000453438 462 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AK3P2-201ENST00000507976 429 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC104136.1-201ENST00000512969 394 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
HIST1H3AP68431 Y_RNA.676-201ENST00000516393 96 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AL391840.1-201ENST00000571144 367 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AL357312.1-201ENST00000603879 298 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AC112191.3-201ENST00000604371 277 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 AL445984.1-201ENST00000637834 659 ntBASIC0.26□□□□□ -2.37
HIST1H3AP68431 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
HIST1H3AP68431 RNU4-1-201ENST00000363925 141 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 Y_RNA.226-201ENST00000364337 114 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms