Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIR1185-1-201ENST00000408598 86 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 AC244250.2-201ENST00000418731 148 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 DEFB130D-201ENST00000426866 237 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 AC092685.1-201ENST00000447960 1243 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 snoU13.19-201ENST00000459148 104 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 MTND2P33-201ENST00000506452 1031 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 RNU6-881P-201ENST00000516813 102 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 MTND2P7-201ENST00000521337 640 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 MIR3152-201ENST00000579801 74 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 AC018462.2-201ENST00000605375 395 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.72□□□□□ -2.68
RPL39P62891 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 SNORA2.2-201ENST00000365473 135 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 AL590135.1-201ENST00000422215 156 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 AC019205.3-201ENST00000424573 156 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 ISCA1P1-201ENST00000426679 387 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.73□□□□□ -2.69
RPL39P62891 AC016700.2-201ENST00000446011 156 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 snoU13.11-201ENST00000459219 104 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 AC015911.1-201ENST00000495111 156 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-1.73□□□□□ -2.69
RPL39P62891 AC093788.1-201ENST00000609356 927 ntBASIC-1.73□□□□□ -2.69
RPL39P62891 U8.5-201ENST00000364528 136 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AL451054.2-201ENST00000420896 202 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 MTND1P14-201ENST00000427400 950 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.74□□□□□ -2.69
RPL39P62891 MTCO2P7-201ENST00000446518 666 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 MED28P2-201ENST00000475771 317 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AC021146.6-201ENST00000514659 117 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AC105029.1-201ENST00000520250 669 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AP002004.2-201ENST00000531656 154 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 AC006441.5-201ENST00000612680 209 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 MTND5P31-201ENST00000419366 1374 ntBASIC-1.74□□□□□ -2.69
RPL39P62891 SNORA72.2-201ENST00000365028 127 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 RNU6-30P-201ENST00000384561 107 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 MIR660-201ENST00000385235 97 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 MIR1298-201ENST00000408783 112 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 FCF1P9-201ENST00000412546 282 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 RPL21P38-201ENST00000418090 167 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 MTND2P9-201ENST00000422293 931 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.75□□□□□ -2.69
RPL39P62891 AL133217.1-201ENST00000450980 425 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.75□□□□□ -2.69
RPL39P62891 RN7SKP19-201ENST00000516016 252 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 AC090186.1-201ENST00000605991 572 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 MTND5P33-201ENST00000571250 1450 ntBASIC-1.75□□□□□ -2.69
RPL39P62891 RNA5SP192-201ENST00000364404 120 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 RNU6-921P-201ENST00000384361 107 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 AL133396.1-201ENST00000432048 687 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 MIR378F-201ENST00000578143 78 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 MIR3192-201ENST00000584920 77 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 Z99289.3-201ENST00000605586 594 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 MIR7107-201ENST00000611489 80 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 uc_338.19-201ENST00000616808 99 ntBASIC-1.76□□□□□ -2.69
RPL39P62891 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.76□□□□□ -2.69
RPL39P62891 RNA5SP205-201ENST00000364653 136 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 RNU4-16P-201ENST00000364737 141 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 RNU6-48P-201ENST00000384161 107 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 LARP1BP3-201ENST00000437229 869 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.77□□□□□ -2.69
RPL39P62891 RNA5SP66-201ENST00000517178 101 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.77□□□□□ -2.69
RPL39P62891 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.77□□□□□ -2.69
RPL39P62891 LSM6P2-201ENST00000552208 177 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 AL390123.1-201ENST00000603216 237 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
RPL39P62891 SCARNA4-201ENST00000629045 128 ntBASIC-1.77□□□□□ -2.69
RPL39P62891 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 Y_RNA.245-201ENST00000364493 95 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 RNU6-116P-201ENST00000384042 109 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 RNU2-15P-201ENST00000410692 191 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 TAF13P2-201ENST00000416876 286 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 MLLT10P1-201ENST00000418346 262 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.78□□□□□ -2.69
RPL39P62891 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.78□□□□□ -2.69
RPL39P62891 AL353752.1-201ENST00000454946 260 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 AC009646.1-201ENST00000510455 318 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 SNORD111.1-201ENST00000516421 86 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 SNORA18.7-201ENST00000516910 131 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-1.78□□□□□ -2.69
RPL39P62891 AL391840.1-201ENST00000571144 367 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 MIR4275-201ENST00000636486 87 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 MTND4P9-201ENST00000507819 1346 ntBASIC-1.78□□□□□ -2.69
RPL39P62891 SNORA72.1-201ENST00000363485 129 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 SNORA81-201ENST00000408493 178 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 TPMTP2-201ENST00000414372 726 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-1.79□□□□□ -2.7
RPL39P62891 MTCO3P27-201ENST00000514397 196 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 RNU6-977P-201ENST00000516411 103 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 MIR4499-201ENST00000584834 69 ntBASIC-1.79□□□□□ -2.7
RPL39P62891 RNU6-43P-201ENST00000384302 107 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 CCDC58P2-201ENST00000417131 366 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 RPS15AP10-201ENST00000432472 382 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms