Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC245060.5-201ENST00000610778 3293 ntBASIC1.68□□□□□ -2.14
SRP54P61011 Y_RNA.123-201ENST00000363338 102 ntBASIC1.68□□□□□ -2.14
SRP54P61011 Y_RNA.194-201ENST00000363985 102 ntBASIC1.68□□□□□ -2.14
SRP54P61011 RNU6-968P-201ENST00000384076 107 ntBASIC1.68□□□□□ -2.14
SRP54P61011 RNU6-933P-201ENST00000384424 107 ntBASIC1.68□□□□□ -2.14
SRP54P61011 SNORA17.3-201ENST00000391159 129 ntBASIC1.68□□□□□ -2.14
SRP54P61011 MIR300-201ENST00000401138 83 ntBASIC1.68□□□□□ -2.14
SRP54P61011 RNA5SP494-201ENST00000410653 129 ntBASIC1.68□□□□□ -2.14
SRP54P61011 MTCO1P21-201ENST00000416634 589 ntBASIC1.68□□□□□ -2.14
SRP54P61011 AL357134.1-201ENST00000445848 426 ntBASIC1.68□□□□□ -2.14
SRP54P61011 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.68□□□□□ -2.14
SRP54P61011 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
SRP54P61011 AC010531.2-201ENST00000465012 153 ntBASIC1.68□□□□□ -2.14
SRP54P61011 RNU6-1332P-201ENST00000516666 104 ntBASIC1.68□□□□□ -2.14
SRP54P61011 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
SRP54P61011 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.68□□□□□ -2.14
SRP54P61011 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.68□□□□□ -2.14
SRP54P61011 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SRP54P61011 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
SRP54P61011 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
SRP54P61011 AC005562.2-201ENST00000618264 111 ntBASIC1.68□□□□□ -2.14
SRP54P61011 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SRP54P61011 Y_RNA.132-201ENST00000363421 102 ntBASIC1.67□□□□□ -2.14
SRP54P61011 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
SRP54P61011 RNU4-24P-201ENST00000364565 139 ntBASIC1.67□□□□□ -2.14
SRP54P61011 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
SRP54P61011 MIR450B-201ENST00000401182 78 ntBASIC1.67□□□□□ -2.14
SRP54P61011 RNU6-908P-201ENST00000410160 94 ntBASIC1.67□□□□□ -2.14
SRP54P61011 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SRP54P61011 AC108667.1-201ENST00000428618 249 ntBASIC1.67□□□□□ -2.14
SRP54P61011 MTND3P21-201ENST00000433774 331 ntBASIC1.67□□□□□ -2.14
SRP54P61011 AC027575.1-201ENST00000481064 460 ntBASIC1.67□□□□□ -2.14
SRP54P61011 AC010409.1-201ENST00000487382 476 ntBASIC1.67□□□□□ -2.14
SRP54P61011 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.67□□□□□ -2.14
SRP54P61011 DEFB131C-201ENST00000528817 165 ntBASIC1.67□□□□□ -2.14
SRP54P61011 AC092954.2-201ENST00000609103 430 ntBASIC1.67□□□□□ -2.14
SRP54P61011 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SRP54P61011 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SRP54P61011 AL159152.1-201ENST00000635019 2587 ntBASIC1.66□□□□□ -2.14
SRP54P61011 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SRP54P61011 RNU6-483P-201ENST00000384088 108 ntBASIC1.66□□□□□ -2.14
SRP54P61011 RNU6-784P-201ENST00000384330 106 ntBASIC1.66□□□□□ -2.14
SRP54P61011 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP54P61011 NDUFA5P4-201ENST00000436704 385 ntBASIC1.66□□□□□ -2.14
SRP54P61011 MTATP6P26-201ENST00000445926 662 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AC083904.1-201ENST00000487828 231 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AC093534.1-201ENST00000504977 132 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP54P61011 AC096745.1-201ENST00000509945 370 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP54P61011 RNU2-34P-201ENST00000516534 121 ntBASIC1.66□□□□□ -2.14
SRP54P61011 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP54P61011 AC026371.1-201ENST00000551867 419 ntBASIC1.66□□□□□ -2.14
SRP54P61011 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
SRP54P61011 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
SRP54P61011 AC104458.1-201ENST00000608243 463 ntBASIC1.66□□□□□ -2.14
SRP54P61011 RNU6-254P-201ENST00000363377 107 ntBASIC1.65□□□□□ -2.15
SRP54P61011 RNU6-112P-201ENST00000363599 104 ntBASIC1.65□□□□□ -2.15
SRP54P61011 MIR521-1-201ENST00000384902 87 ntBASIC1.65□□□□□ -2.15
SRP54P61011 RNU6-780P-201ENST00000391030 104 ntBASIC1.65□□□□□ -2.15
SRP54P61011 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
SRP54P61011 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP54P61011 ATP5J2P3-201ENST00000451550 258 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP54P61011 AC087477.1-201ENST00000465747 340 ntBASIC1.65□□□□□ -2.15
SRP54P61011 TRBVA-201ENST00000498804 316 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP54P61011 Y_RNA.665-201ENST00000516177 98 ntBASIC1.65□□□□□ -2.15
SRP54P61011 Y_RNA.704-201ENST00000516851 102 ntBASIC1.65□□□□□ -2.15
SRP54P61011 RNU6-856P-201ENST00000516959 98 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.65□□□□□ -2.15
SRP54P61011 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC010525.2-201ENST00000590920 195 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC016727.2-201ENST00000603988 621 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC103591.3-201ENST00000608684 209 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AL133215.3-201ENST00000609801 448 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC083806.3-201ENST00000614016 455 ntBASIC1.65□□□□□ -2.15
SRP54P61011 TCL6_2.1-201ENST00000615162 119 ntBASIC1.65□□□□□ -2.15
SRP54P61011 AC137590.2-201ENST00000619709 240 ntBASIC1.65□□□□□ -2.15
SRP54P61011 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.65□□□□□ -2.15
SRP54P61011 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.64□□□□□ -2.15
SRP54P61011 SNORD113-7-201ENST00000363762 77 ntBASIC1.64□□□□□ -2.15
SRP54P61011 MIR1283-1-201ENST00000408494 87 ntBASIC1.64□□□□□ -2.15
SRP54P61011 OR2AQ1P-201ENST00000451972 200 ntBASIC1.64□□□□□ -2.15
SRP54P61011 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.64□□□□□ -2.15
SRP54P61011 AC067942.3-201ENST00000512025 362 ntBASIC1.64□□□□□ -2.15
SRP54P61011 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
SRP54P61011 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.64□□□□□ -2.15
SRP54P61011 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.64□□□□□ -2.15
SRP54P61011 MRPS36P4-201ENST00000534436 298 ntBASIC1.64□□□□□ -2.15
SRP54P61011 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.64□□□□□ -2.15
SRP54P61011 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.64□□□□□ -2.15
SRP54P61011 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
SRP54P61011 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
SRP54P61011 MIR1321-201ENST00000637766 79 ntBASIC1.64□□□□□ -2.15
SRP54P61011 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms