Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC027288.2-201ENST00000553028 243 ntBASIC2.13□□□□□ -2.07
CDH11P55287 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH11P55287 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
CDH11P55287 AL080274.1-201ENST00000605565 220 ntBASIC2.13□□□□□ -2.07
CDH11P55287 AC133104.2-201ENST00000615272 193 ntBASIC2.13□□□□□ -2.07
CDH11P55287 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH11P55287 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
CDH11P55287 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.12□□□□□ -2.07
CDH11P55287 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CDH11P55287 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDH11P55287 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDH11P55287 RNA5SP289-201ENST00000362332 137 ntBASIC2.12□□□□□ -2.07
CDH11P55287 Y_RNA.5-201ENST00000362334 102 ntBASIC2.12□□□□□ -2.07
CDH11P55287 Y_RNA.146-201ENST00000363549 102 ntBASIC2.12□□□□□ -2.07
CDH11P55287 RNU6-99P-201ENST00000364721 107 ntBASIC2.12□□□□□ -2.07
CDH11P55287 RNA5SP240-201ENST00000365355 128 ntBASIC2.12□□□□□ -2.07
CDH11P55287 Y_RNA.431-201ENST00000384086 102 ntBASIC2.12□□□□□ -2.07
CDH11P55287 SNORA70B-201ENST00000384210 135 ntBASIC2.12□□□□□ -2.07
CDH11P55287 SNORA67.4-201ENST00000384688 142 ntBASIC2.12□□□□□ -2.07
CDH11P55287 MIR32-201ENST00000384965 70 ntBASIC2.12□□□□□ -2.07
CDH11P55287 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
CDH11P55287 MIR208B-201ENST00000401172 77 ntBASIC2.12□□□□□ -2.07
CDH11P55287 AL359511.1-201ENST00000402970 211 ntBASIC2.12□□□□□ -2.07
CDH11P55287 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH11P55287 CBX3P6-201ENST00000430257 527 ntBASIC2.12□□□□□ -2.07
CDH11P55287 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH11P55287 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
CDH11P55287 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH11P55287 AL670379.2-201ENST00000604983 252 ntBASIC2.12□□□□□ -2.07
CDH11P55287 AC080078.3-201ENST00000605407 463 ntBASIC2.12□□□□□ -2.07
CDH11P55287 AL355802.3-201ENST00000607571 545 ntBASIC2.12□□□□□ -2.07
CDH11P55287 AC008121.3-201ENST00000618726 433 ntBASIC2.12□□□□□ -2.07
CDH11P55287 AC090517.3-201ENST00000625170 141 ntBASIC2.12□□□□□ -2.07
CDH11P55287 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH11P55287 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH11P55287 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH11P55287 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH11P55287 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
CDH11P55287 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH11P55287 Y_RNA.11-201ENST00000362375 109 ntBASIC2.11□□□□□ -2.07
CDH11P55287 RNU6-490P-201ENST00000362985 107 ntBASIC2.11□□□□□ -2.07
CDH11P55287 U3.9-201ENST00000363823 204 ntBASIC2.11□□□□□ -2.07
CDH11P55287 Y_RNA.197-201ENST00000364004 102 ntBASIC2.11□□□□□ -2.07
CDH11P55287 RNU4-76P-201ENST00000364509 141 ntBASIC2.11□□□□□ -2.07
CDH11P55287 Y_RNA.496-201ENST00000384444 101 ntBASIC2.11□□□□□ -2.07
CDH11P55287 Y_RNA.577-201ENST00000384794 101 ntBASIC2.11□□□□□ -2.07
CDH11P55287 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
CDH11P55287 MRPS18CP6-201ENST00000423587 223 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC018865.2-201ENST00000423631 129 ntBASIC2.11□□□□□ -2.07
CDH11P55287 MTCYBP10-201ENST00000424905 650 ntBASIC2.11□□□□□ -2.07
CDH11P55287 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDH11P55287 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH11P55287 AC107222.1-201ENST00000510899 637 ntBASIC2.11□□□□□ -2.07
CDH11P55287 RNU7-175P-201ENST00000515915 61 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.11□□□□□ -2.07
CDH11P55287 DEFB131C-201ENST00000528817 165 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC021269.2-201ENST00000532318 330 ntBASIC2.11□□□□□ -2.07
CDH11P55287 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH11P55287 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH11P55287 AC016727.2-201ENST00000603988 621 ntBASIC2.11□□□□□ -2.07
CDH11P55287 CYP2C61P-201ENST00000604072 290 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AL132822.1-201ENST00000617063 513 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC087588.2-201ENST00000617667 426 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
CDH11P55287 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC090574.1-201ENST00000623186 233 ntBASIC2.11□□□□□ -2.07
CDH11P55287 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
CDH11P55287 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH11P55287 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
CDH11P55287 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH11P55287 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH11P55287 AC007336.1-201ENST00000576365 3828 ntBASIC2.1□□□□□ -2.07
CDH11P55287 U8.2-201ENST00000363156 134 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU6-137P-201ENST00000363680 108 ntBASIC2.1□□□□□ -2.07
CDH11P55287 MIR153-2-201ENST00000385225 87 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU6-1093P-201ENST00000391194 107 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU2-63P-201ENST00000410792 194 ntBASIC2.1□□□□□ -2.07
CDH11P55287 AL137792.2-201ENST00000443484 235 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
CDH11P55287 MIR2053-201ENST00000459295 91 ntBASIC2.1□□□□□ -2.07
CDH11P55287 AC026436.1-201ENST00000510537 270 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU6-699P-201ENST00000517081 110 ntBASIC2.1□□□□□ -2.07
CDH11P55287 RNU6-58P-201ENST00000517143 103 ntBASIC2.1□□□□□ -2.07
CDH11P55287 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH11P55287 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH11P55287 uc_338.22-201ENST00000622722 187 ntBASIC2.1□□□□□ -2.07
CDH11P55287 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDH11P55287 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH11P55287 BX322639.1-202ENST00000423987 2213 ntBASIC2.1□□□□□ -2.07
CDH11P55287 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CDH11P55287 RNU6-1159P-201ENST00000362933 107 ntBASIC2.09□□□□□ -2.07
CDH11P55287 Y_RNA.112-201ENST00000363250 102 ntBASIC2.09□□□□□ -2.07
CDH11P55287 MIR190B-201ENST00000401119 79 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AL078595.1-201ENST00000404458 226 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AL135786.1-201ENST00000415892 214 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH11P55287 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.09□□□□□ -2.07
CDH11P55287 AL035666.1-201ENST00000446195 348 ntBASIC2.09□□□□□ -2.07
CDH11P55287 UBE2V1P7-201ENST00000446395 340 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms