Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.17□□□□□ -2.06
LBX1P52954 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.17□□□□□ -2.06
LBX1P52954 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
LBX1P52954 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LBX1P52954 AC092268.1-201ENST00000342691 405 ntBASIC2.16□□□□□ -2.06
LBX1P52954 RNU5B-2P-201ENST00000363036 113 ntBASIC2.16□□□□□ -2.06
LBX1P52954 SNORA67.1-201ENST00000364749 141 ntBASIC2.16□□□□□ -2.06
LBX1P52954 RNU6-174P-201ENST00000410406 106 ntBASIC2.16□□□□□ -2.06
LBX1P52954 RNU6-1245P-201ENST00000411130 106 ntBASIC2.16□□□□□ -2.06
LBX1P52954 NCOR1P3-201ENST00000420479 303 ntBASIC2.16□□□□□ -2.06
LBX1P52954 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.16□□□□□ -2.06
LBX1P52954 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.16□□□□□ -2.06
LBX1P52954 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.16□□□□□ -2.06
LBX1P52954 RPS27P27-201ENST00000498779 255 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AC005741.1-201ENST00000511094 432 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AC026782.1-201ENST00000512952 449 ntBASIC2.16□□□□□ -2.06
LBX1P52954 RNU6-1016P-201ENST00000516689 94 ntBASIC2.16□□□□□ -2.06
LBX1P52954 SNORA31.16-201ENST00000516773 139 ntBASIC2.16□□□□□ -2.06
LBX1P52954 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
LBX1P52954 RNU6-273P-201ENST00000516937 96 ntBASIC2.16□□□□□ -2.06
LBX1P52954 SNORA48.11-201ENST00000517015 89 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AC018630.3-201ENST00000542637 96 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AC023824.2-201ENST00000566185 400 ntBASIC2.16□□□□□ -2.06
LBX1P52954 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.16□□□□□ -2.06
LBX1P52954 MIR5194-201ENST00000582634 120 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AL034555.1-201ENST00000604816 211 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AC009994.1-201ENST00000606889 253 ntBASIC2.16□□□□□ -2.06
LBX1P52954 AL132765.2-201ENST00000610812 351 ntBASIC2.16□□□□□ -2.06
LBX1P52954 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.16□□□□□ -2.06
LBX1P52954 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.16□□□□□ -2.06
LBX1P52954 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
LBX1P52954 MTND4P12-201ENST00000498999 1377 ntBASIC2.15□□□□□ -2.07
LBX1P52954 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LBX1P52954 Y_RNA.263-201ENST00000364659 114 ntBASIC2.15□□□□□ -2.07
LBX1P52954 RNU6-842P-201ENST00000384269 107 ntBASIC2.15□□□□□ -2.07
LBX1P52954 RNU6-1106P-201ENST00000390845 107 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AL591034.2-201ENST00000402839 359 ntBASIC2.15□□□□□ -2.07
LBX1P52954 RNU4-14P-201ENST00000410858 122 ntBASIC2.15□□□□□ -2.07
LBX1P52954 RNU2-41P-201ENST00000410991 178 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AL139396.1-201ENST00000421137 167 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AL358453.1-201ENST00000422522 250 ntBASIC2.15□□□□□ -2.07
LBX1P52954 MTND3P9-201ENST00000429526 346 ntBASIC2.15□□□□□ -2.07
LBX1P52954 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.15□□□□□ -2.07
LBX1P52954 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.15□□□□□ -2.07
LBX1P52954 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
LBX1P52954 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.15□□□□□ -2.07
LBX1P52954 RNU7-26P-201ENST00000458980 63 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
LBX1P52954 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.15□□□□□ -2.07
LBX1P52954 AC114801.2-201ENST00000503825 781 ntBASIC2.15□□□□□ -2.07
LBX1P52954 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.15□□□□□ -2.07
LBX1P52954 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.15□□□□□ -2.07
LBX1P52954 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LBX1P52954 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.15□□□□□ -2.07
LBX1P52954 MIR3136-201ENST00000583498 78 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AC018462.2-201ENST00000605375 395 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AC124303.1-201ENST00000605703 360 ntBASIC2.15□□□□□ -2.07
LBX1P52954 MIR3976-201ENST00000606807 139 ntBASIC2.15□□□□□ -2.07
LBX1P52954 AC005520.5-201ENST00000613926 164 ntBASIC2.15□□□□□ -2.07
LBX1P52954 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.15□□□□□ -2.07
LBX1P52954 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.15□□□□□ -2.07
LBX1P52954 AC009487.4-201ENST00000624969 3585 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.14□□□□□ -2.07
LBX1P52954 RNU4-15P-201ENST00000362613 141 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RNU6-212P-201ENST00000362642 104 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RNA5SP125-201ENST00000364843 120 ntBASIC2.14□□□□□ -2.07
LBX1P52954 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LBX1P52954 RNU6-1286P-201ENST00000383871 107 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RNU6-306P-201ENST00000384617 107 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RPS26P42-201ENST00000413485 326 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AC138623.1-201ENST00000418060 216 ntBASIC2.14□□□□□ -2.07
LBX1P52954 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
LBX1P52954 EIF4EP2-201ENST00000422816 654 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AC244670.1-201ENST00000436879 112 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AC090515.1-201ENST00000465295 476 ntBASIC2.14□□□□□ -2.07
LBX1P52954 MTND4P17-201ENST00000470444 350 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AC016632.1-201ENST00000503994 196 ntBASIC2.14□□□□□ -2.07
LBX1P52954 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.14□□□□□ -2.07
LBX1P52954 RNU6-507P-201ENST00000516045 100 ntBASIC2.14□□□□□ -2.07
LBX1P52954 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.14□□□□□ -2.07
LBX1P52954 MIR5696-201ENST00000578474 85 ntBASIC2.14□□□□□ -2.07
LBX1P52954 RPL30P11-203ENST00000598995 310 ntBASIC2.14□□□□□ -2.07
LBX1P52954 SNORD98-201ENST00000636377 67 ntBASIC2.14□□□□□ -2.07
LBX1P52954 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
LBX1P52954 Y_RNA.142-201ENST00000363491 102 ntBASIC2.13□□□□□ -2.07
LBX1P52954 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
LBX1P52954 SNORA36A-201ENST00000384221 132 ntBASIC2.13□□□□□ -2.07
LBX1P52954 RNU6-1274P-201ENST00000384557 107 ntBASIC2.13□□□□□ -2.07
LBX1P52954 MTCYBP2-201ENST00000407745 171 ntBASIC2.13□□□□□ -2.07
LBX1P52954 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
LBX1P52954 AC074085.1-201ENST00000413598 418 ntBASIC2.13□□□□□ -2.07
LBX1P52954 EIF1AXP1-201ENST00000419267 435 ntBASIC2.13□□□□□ -2.07
LBX1P52954 AC012308.1-201ENST00000451232 178 ntBASIC2.13□□□□□ -2.07
LBX1P52954 PCMTD1P1-201ENST00000455560 355 ntBASIC2.13□□□□□ -2.07
LBX1P52954 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.13□□□□□ -2.07
LBX1P52954 AC018868.1-201ENST00000491307 315 ntBASIC2.13□□□□□ -2.07
LBX1P52954 AF186996.7-201ENST00000492781 209 ntBASIC2.13□□□□□ -2.07
LBX1P52954 RPS29P11-201ENST00000496507 171 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms