Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SNORA48.1-201ENST00000390879 135 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CAPN3P20807 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CAPN3P20807 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.2□□□□□ -2.06
CAPN3P20807 AC004386.2-201ENST00000441858 148 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 AL357134.1-201ENST00000445848 426 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 AC009237.7-201ENST00000447357 229 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 SNORA59B-202ENST00000578183 701 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 MIR3942-201ENST00000585264 109 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.2□□□□□ -2.06
CAPN3P20807 AC016727.2-201ENST00000603988 621 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.2□□□□□ -2.06
CAPN3P20807 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.2□□□□□ -2.06
CAPN3P20807 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
CAPN3P20807 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
CAPN3P20807 AC245060.5-201ENST00000610778 3293 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 SNORD50.1-201ENST00000362987 71 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 NCOR1P3-201ENST00000420479 303 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AL358453.1-201ENST00000422522 250 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 WARS2P1-201ENST00000429678 537 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AC112492.4-201ENST00000456549 352 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 RNA5SP454-201ENST00000517231 127 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
CAPN3P20807 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.19□□□□□ -2.06
CAPN3P20807 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.19□□□□□ -2.06
CAPN3P20807 MIR4273-201ENST00000582824 84 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AC018638.8-201ENST00000588755 281 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AC007014.2-201ENST00000615581 479 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
CAPN3P20807 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
CAPN3P20807 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.18□□□□□ -2.06
CAPN3P20807 BX322639.1-202ENST00000423987 2213 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 RNA5SP99-201ENST00000364020 114 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 SNORD114-6-201ENST00000364393 72 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 RNU6-831P-201ENST00000384548 107 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 MIR676-201ENST00000390702 67 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 AC079354.2-201ENST00000453523 154 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.18□□□□□ -2.06
CAPN3P20807 RNU6-566P-201ENST00000516790 107 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 AF235103.2-201ENST00000525753 346 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
CAPN3P20807 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CAPN3P20807 RNU6-596P-201ENST00000365395 98 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 MIR153-2-201ENST00000385225 87 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.17□□□□□ -2.06
CAPN3P20807 MTND1P4-201ENST00000435196 415 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 AC096638.1-201ENST00000444678 216 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.17□□□□□ -2.06
CAPN3P20807 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.17□□□□□ -2.06
CAPN3P20807 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.17□□□□□ -2.06
CAPN3P20807 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
CAPN3P20807 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.17□□□□□ -2.06
CAPN3P20807 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
CAPN3P20807 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
CAPN3P20807 RNU6-137P-201ENST00000363680 108 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 RNU6-245P-201ENST00000384020 107 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.16□□□□□ -2.06
CAPN3P20807 MTATP6P13-201ENST00000438531 667 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.16□□□□□ -2.06
CAPN3P20807 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.16□□□□□ -2.06
CAPN3P20807 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CAPN3P20807 MIR4790-201ENST00000577799 79 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.16□□□□□ -2.06
CAPN3P20807 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.16□□□□□ -2.06
CAPN3P20807 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.16□□□□□ -2.06
CAPN3P20807 AL159152.1-201ENST00000635019 2587 ntBASIC2.16□□□□□ -2.06
CAPN3P20807 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CAPN3P20807 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CAPN3P20807 RNU6-545P-201ENST00000362681 104 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 Y_RNA.86-201ENST00000363020 111 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 SNORD115-8-201ENST00000363856 82 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 SNORD115-38-201ENST00000365037 82 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 Y_RNA.338-201ENST00000365320 114 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 Y_RNA.490-201ENST00000384413 102 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 RNU6-541P-201ENST00000384709 110 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 MIR32-201ENST00000384965 70 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.15□□□□□ -2.07
CAPN3P20807 NFU1P2-201ENST00000448700 469 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 ATP5J2P3-201ENST00000451550 258 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 snoU13.30-201ENST00000458951 104 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 AC067942.3-201ENST00000512025 362 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 RNU4-49P-201ENST00000516080 140 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.15□□□□□ -2.07
CAPN3P20807 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms