Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC004941.2-201ENST00000427009 228 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.03□□□□□ -2.25
COL11A1P12107 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.03□□□□□ -2.25
COL11A1P12107 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.03□□□□□ -2.25
COL11A1P12107 AC083798.1-201ENST00000472671 131 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AC011005.2-201ENST00000487324 359 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AC116655.1-201ENST00000508324 901 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 ACA59.2-201ENST00000517061 156 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.03□□□□□ -2.25
COL11A1P12107 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.03□□□□□ -2.25
COL11A1P12107 EIF1P4-201ENST00000572664 335 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AC092954.2-201ENST00000609103 430 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AC139792.3-201ENST00000623525 224 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 MIR3662-201ENST00000637030 95 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 HAUS6P2-201ENST00000433254 2404 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 OR4G2P-201ENST00000328113 903 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 SNORD114-23-201ENST00000363536 72 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 RNU6-1317P-201ENST00000364582 104 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 Y_RNA.378-201ENST00000365652 113 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 Y_RNA.554-201ENST00000384672 102 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 RNU6-780P-201ENST00000391030 104 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 BTF3L4P2-201ENST00000392798 346 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 RNU6-648P-201ENST00000410190 107 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 Y_RNA.619-201ENST00000410951 90 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 RNU6-373P-201ENST00000411247 98 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC138623.1-201ENST00000418060 216 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.02□□□□□ -2.25
COL11A1P12107 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.02□□□□□ -2.25
COL11A1P12107 AC073415.1-201ENST00000449240 153 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 SRRM1P2-201ENST00000464531 1192 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC018437.1-201ENST00000492214 406 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.02□□□□□ -2.25
COL11A1P12107 RNU6-189P-201ENST00000516120 101 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 RNA5SP503-201ENST00000517047 117 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC069113.1-201ENST00000517763 267 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.02□□□□□ -2.25
COL11A1P12107 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.02□□□□□ -2.25
COL11A1P12107 AL137161.1-201ENST00000532231 390 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 MIR548AC-201ENST00000585049 88 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 SNRPGP17-201ENST00000603780 214 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AL355598.1-201ENST00000604169 202 ntBASIC1.02□□□□□ -2.25
COL11A1P12107 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.02□□□□□ -2.25
COL11A1P12107 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
COL11A1P12107 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
COL11A1P12107 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.02□□□□□ -2.25
COL11A1P12107 AC138393.1-203ENST00000327086 343 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 Y_RNA.3-201ENST00000362331 103 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 Y_RNA.9-201ENST00000362354 101 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 Y_RNA.256-201ENST00000364594 104 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 RNU6-43P-201ENST00000384302 107 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 MIR544A-201ENST00000384855 91 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 MIR29C-201ENST00000385231 88 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 SNORD37.1-201ENST00000390968 65 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 OR9R1P-201ENST00000412200 877 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 UBE2V1P10-201ENST00000414685 269 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AL589823.1-201ENST00000429577 183 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC092001.1-201ENST00000453012 261 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.01□□□□□ -2.25
COL11A1P12107 FAM206BP-201ENST00000510179 541 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 CENPUP1-201ENST00000526649 1202 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 TPRKBP2-201ENST00000565969 475 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.01□□□□□ -2.25
COL11A1P12107 MIR3672-201ENST00000584290 82 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC010900.2-201ENST00000604508 210 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC092807.2-201ENST00000609367 243 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.01□□□□□ -2.25
COL11A1P12107 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC024614.3-201ENST00000637860 256 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 U4.7-201ENST00000638126 106 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 RNU6-486P-201ENST00000363116 107 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 MIR10A-201ENST00000385043 110 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 SNORA16.2-201ENST00000390991 127 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 RNU6-1245P-201ENST00000411130 106 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
COL11A1P12107 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.01□□□□□ -2.25
COL11A1P12107 RNU6-1208P-201ENST00000459588 107 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.01□□□□□ -2.25
COL11A1P12107 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.01□□□□□ -2.25
COL11A1P12107 SNORA19.2-201ENST00000516013 114 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 RNA5SP395-201ENST00000516567 118 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 MIR4424-201ENST00000585257 86 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC073539.2-201ENST00000597113 165 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AC080078.2-201ENST00000603766 501 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 CTHRC1P1-201ENST00000605383 469 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 uc_338.34-201ENST00000617467 174 ntBASIC1.01□□□□□ -2.25
COL11A1P12107 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL11A1P12107 AC018630.2-201ENST00000534866 2403 ntBASIC1□□□□□ -2.25
COL11A1P12107 RNU6-1285P-201ENST00000363480 105 ntBASIC1□□□□□ -2.25
COL11A1P12107 RNY4P14-201ENST00000363656 96 ntBASIC1□□□□□ -2.25
COL11A1P12107 Y_RNA.399-201ENST00000383955 105 ntBASIC1□□□□□ -2.25
COL11A1P12107 RNU6-1222P-201ENST00000384615 107 ntBASIC1□□□□□ -2.25
COL11A1P12107 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1□□□□□ -2.25
COL11A1P12107 RPS29P13-201ENST00000402041 169 ntBASIC1□□□□□ -2.25
COL11A1P12107 RAP1BP3-201ENST00000407180 549 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms