Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MIR520G-201ENST00000385064 90 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 MIR520H-201ENST00000385126 88 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU6-440P-201ENST00000390882 105 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU2-59P-201ENST00000410482 191 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AL121578.1-201ENST00000428051 892 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 snoU13.21-201ENST00000459368 105 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC007547.1-201ENST00000462177 490 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC022447.4-201ENST00000504053 364 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 MTND3P5-201ENST00000512798 333 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU6-914P-201ENST00000516749 109 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 MTND1P36-201ENST00000522384 936 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 ZNF321P-202ENST00000550843 495 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC109446.1-201ENST00000566172 220 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC104695.3-201ENST00000604052 296 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 AC007684.1-201ENST00000609671 477 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 MTND4P4-201ENST00000439033 1366 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AP000568.1-201ENST00000282964 442 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MIR1-1-201ENST00000362147 71 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU6-395P-201ENST00000365662 106 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU6-142P-201ENST00000384019 107 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNA5SP127-201ENST00000411051 133 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AL627311.1-201ENST00000431514 115 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MTND4P25-201ENST00000441039 533 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MTND2P6-201ENST00000455337 1030 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU7-159P-201ENST00000459284 62 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 SNORD126-201ENST00000459475 77 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AC109445.1-201ENST00000512356 383 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU2-34P-201ENST00000516534 121 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 RNU11-2P-201ENST00000516898 142 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AC115990.1-201ENST00000526957 301 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MIR5697-201ENST00000578045 78 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MIR548AO-201ENST00000579992 96 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 7SK.7-201ENST00000603504 247 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AC107905.1-201ENST00000616204 426 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AL109933.3-201ENST00000619095 188 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 AC131159.1-201ENST00000621854 213 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 SNORD98-201ENST00000636377 67 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 MTND5P42-201ENST00000637720 498 ntBASIC-0.52□□□□□ -2.49
CPSF4LA6NMK7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 RNU6-701P-201ENST00000384059 107 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AL663109.1-201ENST00000411498 844 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AC245047.3-201ENST00000429428 127 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AC005534.2-201ENST00000431047 433 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 MTCO1P57-201ENST00000432182 261 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 MTCO3P9-201ENST00000506989 781 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 RNU6-64P-201ENST00000517119 105 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AL158211.1-201ENST00000566763 763 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 uc_338.16-201ENST00000621804 95 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 AC132825.7-201ENST00000638744 335 ntBASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
CPSF4LA6NMK7 SNORA25.3-201ENST00000363205 127 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 SNORD113.3-201ENST00000364630 78 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 RNU6-417P-201ENST00000384712 107 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 MIR19A-201ENST00000384878 82 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 MIR10A-201ENST00000385043 110 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 RNU6-269P-201ENST00000391077 97 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 RNU4-46P-201ENST00000410818 138 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AC006366.1-201ENST00000422002 759 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AL356583.2-201ENST00000426536 280 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 MTND1P31-201ENST00000449206 961 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 ZNF886P-201ENST00000450781 723 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 SNORA76.2-201ENST00000517095 137 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AL138889.2-201ENST00000603883 242 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 AC006927.4-201ENST00000639187 543 ntBASIC-0.54□□□□□ -2.5
CPSF4LA6NMK7 MIR412-201ENST00000362142 91 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 SNORD115-48-201ENST00000364764 76 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 RNU6-424P-201ENST00000384367 105 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 MRPL42P3-201ENST00000401492 326 ntBASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.55□□□□□ -2.5
CPSF4LA6NMK7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms