Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AC005840.1-201ENST00000498412 377 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 RNU6-948P-201ENST00000516374 107 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 RNU6-232P-201ENST00000517144 64 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AP002963.1-201ENST00000530590 184 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AL137161.1-201ENST00000532231 390 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AC009161.2-201ENST00000624626 138 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 RNU6-282P-201ENST00000365357 103 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU6-456P-201ENST00000384493 107 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU6-297P-201ENST00000384636 107 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU6-248P-201ENST00000410720 107 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RPS6P15-201ENST00000431996 751 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 HMGN2P34-201ENST00000437647 269 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU7-34P-201ENST00000459394 64 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AC105417.1-201ENST00000514691 285 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU6-1146P-201ENST00000516282 102 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 SNORA18.6-201ENST00000516792 115 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AC024995.1-201ENST00000523014 93 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 MIR4781-201ENST00000585250 76 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 RNU6-85P-201ENST00000605989 107 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 BX284668.6-201ENST00000606899 438 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AC027449.1-201ENST00000608890 407 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 AC009541.1-201ENST00000438279 2662 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.83□□□□□ -2.28
RBFOX3A6NFN3 SNORA33-201ENST00000363664 130 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 RNA5SP259-201ENST00000365541 109 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 RNU6-321P-201ENST00000410912 106 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 PIGFP2-201ENST00000421400 651 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 Z82205.1-201ENST00000428456 297 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AL356010.1-201ENST00000456364 102 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 SNRPFP3-201ENST00000457792 225 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 HMGN1P12-201ENST00000499125 195 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AC093852.1-201ENST00000503587 266 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 RN7SKP265-201ENST00000516448 223 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AL022345.2-201ENST00000606307 135 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AC004492.1-201ENST00000607036 742 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 U2.17-201ENST00000611454 95 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AC012676.2-201ENST00000619258 186 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 AF246928.1-201ENST00000623768 87 ntBASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RBFOX3A6NFN3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU4-21P-201ENST00000362802 126 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU6-181P-201ENST00000363225 107 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU6-950P-201ENST00000384651 107 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU6-1106P-201ENST00000390845 107 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AL356776.1-201ENST00000406574 447 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC010099.3-201ENST00000423896 409 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU7-125P-201ENST00000458760 62 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 snoU13.6-201ENST00000458785 104 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU7-138P-201ENST00000459479 64 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RPL39P38-201ENST00000467018 153 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 RNU6-445P-201ENST00000516949 107 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 CYCSP23-201ENST00000519781 313 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC008015.1-201ENST00000555505 465 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC068790.2-201ENST00000602601 557 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC104458.1-201ENST00000608243 463 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 AC122133.1-201ENST00000613964 233 ntBASIC0.81□□□□□ -2.28
RBFOX3A6NFN3 FGF7P2-201ENST00000332473 296 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RNU6-227P-201ENST00000362865 103 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RNU6-903P-201ENST00000391270 109 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 CDK8P2-201ENST00000415020 547 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 AC009237.7-201ENST00000447357 229 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 NFU1P2-201ENST00000448700 469 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RPS29P27-201ENST00000463711 170 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RNU6-612P-201ENST00000516909 102 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 RNU6-165P-201ENST00000517170 99 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 MIR5006-201ENST00000583027 110 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 AC016727.2-201ENST00000603988 621 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 AL136370.1-201ENST00000608166 691 ntBASIC0.8□□□□□ -2.28
RBFOX3A6NFN3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 Y_RNA.287-201ENST00000364853 94 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 RNU6-517P-201ENST00000384362 110 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 426.6 ms